RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C VMA4P22203 233 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C TRX1P22217 103 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C MET22P32179 357 aa3.67□□□□□ -1.82
VPS53YJL029C DBF4P32325 704 aa3.67□□□□□ -1.82
VPS53YJL029C RCK2P38623 610 aa3.67□□□□□ -1.82
VPS53YJL029C CBR1P38626 284 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C PPX1P38698 397 aa3.67□□□□□ -1.82
VPS53YJL029C SAK1P38990 1142 aa3.67□□□□□ -1.82
VPS53YJL029C PAC1P39946 494 aaKnown RBP3.67□□□□□ -1.82
VPS53YJL029C ORC3P54790 616 aa3.67□□□□□ -1.82
VPS53YJL029C SSL2Q00578 843 aa3.67□□□□□ -1.82
VPS53YJL029C MSH6Q03834 1242 aa3.67□□□□□ -1.82
VPS53YJL029C VPS38Q05919 439 aa3.67□□□□□ -1.82
VPS53YJL029C THI7Q05998 598 aa3.67□□□□□ -1.82
VPS53YJL029C FRT1Q99332 602 aa3.67□□□□□ -1.82
VPS53YJL029C MSF1P08425 469 aa3.66□□□□□ -1.82
VPS53YJL029C TUB3P09734 445 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C RPL40AP0CH08 128 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C RPL40BP0CH09 128 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C SFL1P20134 766 aa3.66□□□□□ -1.82
VPS53YJL029C DAL81P21657 970 aa3.66□□□□□ -1.82
VPS53YJL029C PHO87P25360 923 aa3.66□□□□□ -1.82
VPS53YJL029C KIP2P28743 706 aa3.66□□□□□ -1.82
VPS53YJL029C CCR4P31384 837 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C KNS1P32350 737 aaPredicted RBP3.66□□□□□ -1.82
VPS53YJL029C GYP6P32806 458 aa3.66□□□□□ -1.82
VPS53YJL029C ADD66P36040 267 aa3.66□□□□□ -1.82
VPS53YJL029C MIC60P36112 540 aa3.66□□□□□ -1.82
VPS53YJL029C SRP68P38687 599 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C AIM18P38884 321 aa3.66□□□□□ -1.82
VPS53YJL029C BAT1P38891 393 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C UBP7P40453 1071 aa3.66□□□□□ -1.82
VPS53YJL029C ASG1P40467 964 aa3.66□□□□□ -1.82
VPS53YJL029C IML2P47031 731 aa3.66□□□□□ -1.82
VPS53YJL029C RFX1P48743 811 aa3.66□□□□□ -1.82
VPS53YJL029C CWC24P53769 259 aa3.66□□□□□ -1.82
VPS53YJL029C PRM1P53835 661 aa3.66□□□□□ -1.82
VPS53YJL029C MET14Q02196 202 aa3.66□□□□□ -1.82
VPS53YJL029C RKM2Q03942 479 aa3.66□□□□□ -1.82
VPS53YJL029C TPO1Q07824 586 aa3.66□□□□□ -1.82
VPS53YJL029C CAN1P04817 590 aa3.66□□□□□ -1.82
VPS53YJL029C MET16P18408 261 aaPredicted RBP3.66□□□□□ -1.82
VPS53YJL029C CAP1P28495 268 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C KAR9P32526 644 aa3.66□□□□□ -1.82
VPS53YJL029C TFB1P32776 642 aa3.66□□□□□ -1.82
VPS53YJL029C RAD5P32849 1169 aaPredicted RBP3.66□□□□□ -1.82
VPS53YJL029C NCL1P38205 684 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C ECM2P38241 364 aaKnown RBP3.66□□□□□ -1.82
VPS53YJL029C PCA1P38360 1216 aa3.66□□□□□ -1.82
VPS53YJL029C TAN1P53072 289 aaPredicted RBP3.66□□□□□ -1.82
VPS53YJL029C BTN2P53286 410 aa3.66□□□□□ -1.82
VPS53YJL029C YNL040WP53960 456 aaPredicted RBP3.66□□□□□ -1.82
VPS53YJL029C YLR346CQ06139 101 aa3.66□□□□□ -1.82
VPS53YJL029C YPR097WQ06839 1073 aa3.66□□□□□ -1.82
VPS53YJL029C FAB1P34756 2278 aa3.66□□□□□ -1.82
VPS53YJL029C PAB1P04147 577 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
VPS53YJL029C CKI1P20485 582 aa3.65□□□□□ -1.82
VPS53YJL029C AAT2P23542 418 aaKnown RBP3.65□□□□□ -1.82
VPS53YJL029C MNE1P24720 663 aa3.65□□□□□ -1.82
VPS53YJL029C ADY2P25613 283 aa3.65□□□□□ -1.82
VPS53YJL029C LIP5P32875 414 aa3.65□□□□□ -1.82
VPS53YJL029C MCX1P38323 520 aaPredicted RBP3.65□□□□□ -1.82
VPS53YJL029C HIS2P38635 335 aa3.65□□□□□ -1.82
VPS53YJL029C TCD1P38756 429 aa3.65□□□□□ -1.82
VPS53YJL029C ATG3P40344 310 aa3.65□□□□□ -1.82
VPS53YJL029C IST3P40565 148 aaPredicted RBP3.65□□□□□ -1.82
VPS53YJL029C HLJ1P48353 224 aa3.65□□□□□ -1.82
VPS53YJL029C TGL2P54857 326 aa3.65□□□□□ -1.82
VPS53YJL029C ADI1Q03677 179 aa3.65□□□□□ -1.82
VPS53YJL029C ENT5Q03769 411 aaKnown RBP3.65□□□□□ -1.82
VPS53YJL029C ARA2Q04212 335 aa3.65□□□□□ -1.82
VPS53YJL029C TRE2Q08693 809 aa3.65□□□□□ -1.82
VPS53YJL029C YLR046CQ12253 270 aa3.65□□□□□ -1.82
VPS53YJL029C SFI1Q12369 946 aa3.65□□□□□ -1.82
VPS53YJL029C MRPL8P22353 238 aa3.65□□□□□ -1.83
VPS53YJL029C YBL055CP34220 418 aaPredicted RBP3.65□□□□□ -1.83
VPS53YJL029C MSR1P38714 643 aa3.65□□□□□ -1.83
VPS53YJL029C YHR078WP38799 552 aa3.65□□□□□ -1.83
VPS53YJL029C SET5P38890 526 aaKnown RBP3.65□□□□□ -1.83
VPS53YJL029C COQ5P49017 307 aa3.65□□□□□ -1.83
VPS53YJL029C RPA14P50106 137 aa3.65□□□□□ -1.83
VPS53YJL029C VEL1P53058 206 aa3.65□□□□□ -1.83
VPS53YJL029C KAP114P53067 1004 aa3.65□□□□□ -1.83
VPS53YJL029C AIM14P53109 570 aa3.65□□□□□ -1.83
VPS53YJL029C YNL144CP53907 740 aa3.65□□□□□ -1.83
VPS53YJL029C RPL22BP56628 122 aaKnown RBP3.65□□□□□ -1.83
VPS53YJL029C PEX13P80667 386 aa3.65□□□□□ -1.83
VPS53YJL029C YMR187CQ03236 431 aa3.65□□□□□ -1.83
VPS53YJL029C PNP1Q05788 311 aa3.65□□□□□ -1.83
VPS53YJL029C AAD15Q08361 143 aa3.65□□□□□ -1.83
VPS53YJL029C YOR059CQ08448 450 aaKnown RBP3.65□□□□□ -1.83
VPS53YJL029C PER33Q12144 273 aa3.65□□□□□ -1.83
VPS53YJL029C EFG1Q3E705 233 aaKnown RBP3.65□□□□□ -1.83
VPS53YJL029C YOR338WQ99326 363 aa3.65□□□□□ -1.83
VPS53YJL029C KAR3P17119 729 aa3.64□□□□□ -1.83
VPS53YJL029C ARF2P19146 181 aaKnown RBP3.64□□□□□ -1.83
VPS53YJL029C GEX1P25596 615 aa3.64□□□□□ -1.83
VPS53YJL029C SRB4P32569 687 aa3.64□□□□□ -1.83
VPS53YJL029C GEX2P36173 615 aa3.64□□□□□ -1.83
VPS53YJL029C MMS21P38632 267 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms