RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH1	YHR120W	YPR084W	Q06821	456 aa		5.19	□□□□□ -1.58
MSH1	YHR120W	AAD4	Q07747	329 aa		5.19	□□□□□ -1.58
MSH1	YHR120W	HEM15	P16622	393 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	MET22	P32179	357 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	KTR4	P38131	464 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	RSM26	P47141	266 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	FAA4	P47912	694 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	LSC1	P53598	329 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	COP1	P53622	1201 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	CPR6	P53691	371 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	PRP3	Q03338	469 aa	Predicted RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	SHE9	Q04172	456 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	ARA2	Q04212	335 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	GPN2	Q08726	347 aa	Predicted RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	WSC3	Q12215	556 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YPK1	P12688	680 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	MET16	P18408	261 aa	Predicted RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	TRX1	P22217	103 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	YBL055C	P34220	418 aa	Predicted RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	YBR032W	P38223	100 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YBR062C	P38239	180 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	URA8	P38627	578 aa	Predicted RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	YIR007W	P40566	764 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	MDJ2	P42834	146 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	GTR1	Q00582	310 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	INA17	Q02888	182 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	RKM2	Q03942	479 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YDR278C	Q05612	105 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	GCR1	P07261	785 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	SPO16	P17122	198 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	FPR1	P20081	114 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
MSH1	YHR120W	SEC6	P32844	805 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	SPT23	P35210	1082 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	PPX1	P38698	397 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	FSH1	P38777	243 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	LAM1	P38851	1228 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	PRM9	P39551	298 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	PRP24	P49960	444 aa	Known RBP	5.18	□□□□□ -1.58
MSH1	YHR120W	NMA2	P53204	395 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YNR065C	P53751	1116 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YNL108C	P53929	270 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	CDC55	Q00362	526 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	TFB2	Q02939	513 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	RPN4	Q03465	531 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	YMR206W	Q03695	313 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	SND1	Q04007	877 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	NDD1	Q08887	554 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	THI21	Q08975	551 aa		5.18	□□□□□ -1.58
MSH1	YHR120W	RAD3	P06839	778 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	HOM2	P13663	365 aa	Known RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	SEC14	P24280	304 aa	Known RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	DBF4	P32325	704 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	MSG5	P38590	489 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	UBP7	P40453	1071 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	AXL1	P40851	1208 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	MRX6	P48564	524 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	VEL1	P53058	206 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	YNL040W	P53960	456 aa	Predicted RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	BET4	Q00618	327 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	YPL109C	Q02981	657 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	IVY1	Q04934	453 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	TY4A-H	Q6Q5P6	413 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	PMS1	P14242	873 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	VHC1	P38329	1120 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	FMO1	P38866	432 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	DUN1	P39009	513 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	EDC3	P39998	551 aa	Known RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	KHA1	P40309	873 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	BST1	P43571	1029 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	SNG1	P46950	547 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	TAN1	P53072	289 aa	Predicted RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	MSH6	Q03834	1242 aa		5.17	□□□□□ -1.58
MSH1	YHR120W	BEM2	P39960	2167 aa	Known RBP	5.17	□□□□□ -1.58
MSH1	YHR120W	HSF1	P10961	833 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	PDR1	P12383	1068 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	BAS1	P22035	811 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	MSH2	P25847	964 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	MVD1	P32377	396 aa	Known RBP	5.16	□□□□□ -1.58
MSH1	YHR120W	ERP2	P39704	215 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	KTR7	P40504	517 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	CNN1	P43618	361 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	CWC24	P53769	259 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	YCS4	Q06156	1176 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	MPC54	Q08550	464 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	GNT1	Q12096	491 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	YMR085W	P0CF18	432 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	ARF2	P19146	181 aa	Known RBP	5.16	□□□□□ -1.58
MSH1	YHR120W	MRPS28	P21771	286 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	HSM3	P38348	480 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	REV7	P38927	245 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	EXO1	P39875	702 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	NOG2	P53742	486 aa	Known RBP	5.16	□□□□□ -1.58
MSH1	YHR120W	NIS1	P53939	407 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	UFO1	Q04511	668 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	YDL073W	Q07454	984 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	YLR012C	Q07927	99 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	MSB2	P32334	1306 aa		5.16	□□□□□ -1.58
MSH1	YHR120W	HIS1	P00498	297 aa	Known RBP	5.15	□□□□□ -1.58
MSH1	YHR120W	PRP4	P20053	465 aa	Known RBP	5.15	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms