RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	PEF1	P53238	335 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	YNL144C	P53907	740 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	YNL092W	P53934	400 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	KOG1	P38873	1557 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	AAC1	P04710	309 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	PCK1	P10963	549 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	YPK1	P12688	680 aa	Known RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	REV1	P12689	985 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	DSS4	P32601	143 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	GND1	P38720	489 aa	Known RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	YIL152W	P40455	235 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	IRC5	P43610	853 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	RNR4	P49723	345 aa	Known RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	YGR237C	P50089	785 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	SHE10	P53075	577 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	RPL15B	P54780	204 aa	Predicted RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	MTD1	Q02046	320 aa	Known RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	SNU56	Q03782	492 aa	Known RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	HRD3	Q05787	833 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	FAP7	Q12055	197 aa	Predicted RBP	0.85	□□□□□ -2.27
NNF2	YGR089W	TAH18	Q12181	623 aa		0.85	□□□□□ -2.27
NNF2	YGR089W	TUF1	P02992	437 aa	Known RBP	0.84	□□□□□ -2.27
NNF2	YGR089W	SAN1	P22470	610 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	CDC5	P32562	705 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	GDA1	P32621	518 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	BZZ1	P38822	633 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	GPP2	P40106	250 aa	Known RBP	0.84	□□□□□ -2.27
NNF2	YGR089W	SQS1	P53866	767 aa	Known RBP	0.84	□□□□□ -2.27
NNF2	YGR089W	ADD37	Q03233	198 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	RAD33	Q04231	177 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	ECM22	Q05958	814 aa	Predicted RBP	0.84	□□□□□ -2.27
NNF2	YGR089W	CYK3	Q07533	885 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	GPN2	Q08726	347 aa	Predicted RBP	0.84	□□□□□ -2.27
NNF2	YGR089W	RSA1	Q08932	381 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	YPR027C	Q12079	277 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	YGR161W-C	Q3E744	92 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	Q0010	Q9ZZX9	128 aa		0.84	□□□□□ -2.27
NNF2	YGR089W	CET1	O13297	549 aa	Predicted RBP	0.84	□□□□□ -2.28
NNF2	YGR089W	BET2	P20133	325 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	ARG1	P22768	420 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	CWH43	P25618	953 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	SRP68	P38687	599 aa	Known RBP	0.84	□□□□□ -2.28
NNF2	YGR089W	EAF5	P39995	279 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	CIR1	P42940	261 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	MNT2	P53059	558 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	YML119W	Q03208	357 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	SKY1	Q03656	742 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	MLH2	Q07980	695 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	YOR378W	Q08902	515 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	RTK1	Q12100	620 aa	Predicted RBP	0.84	□□□□□ -2.28
NNF2	YGR089W	VPS5	Q92331	675 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	MDS3	P53094	1487 aa		0.84	□□□□□ -2.28
NNF2	YGR089W	YPT1	P01123	206 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	URA3	P03962	267 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	AEP2	P22136	580 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	AMD2	P22580	549 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	RRP43	P25359	394 aa	Predicted RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	PRO3	P32263	286 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	SDH8	P38345	138 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	IMD2	P38697	523 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	RRP8	P38961	392 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	VPS8	P39702	1274 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	PEA2	P40091	420 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	MKT1	P40850	830 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	DUG1	P43616	481 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	NIT2	P47016	307 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	IMD3	P50095	523 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	FMP42	Q04991	504 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	CWC2	Q12046	339 aa	Predicted RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	RMP1	Q12530	201 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	YMR230W-A	Q3E7B5	62 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	PNO1	Q99216	274 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	SEC12	P11655	471 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	MAK32	P23060	363 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	FTH1	P38310	465 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	STB5	P38699	743 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	FPR3	P38911	411 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	LAS21	P40367	830 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	MAD2	P40958	196 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	COS12	P53053	380 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	MDR1	P53258	950 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	IMP4	P53941	290 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	BET4	Q00618	327 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	DIN7	Q12086	430 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	GAL4	P04386	881 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	CHO2	P05374	869 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	COX11	P19516	300 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	CBP3	P21560	335 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	NIC96	P34077	839 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	UBP12	P39538	1254 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	SAP1	P39955	897 aa	Known RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	CIN1	P40987	1014 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	AZF1	P41696	914 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	YPT11	P48559	417 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	YNR071C	P53757	342 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	ECM38	Q05902	660 aa	Predicted RBP	0.83	□□□□□ -2.28
NNF2	YGR089W	RAD34	Q06665	692 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	LCB4	Q12246	624 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	RTC1	Q08281	1341 aa		0.83	□□□□□ -2.28
NNF2	YGR089W	PRP45	P28004	379 aa	Predicted RBP	0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 134 ms