RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	RAS1	P01119	309 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	CHL1	P22516	861 aa	Predicted RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	PRE2	P30656	287 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	MIC60	P36112	540 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	FSH1	P38777	243 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	JHD1	P40034	492 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	SEC9	P40357	651 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	RRT14	P40470	206 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	LYS5	P50113	272 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	YGR266W	P53326	701 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	TRS31	Q03337	283 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	GYL1	Q04322	720 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	CRD1	Q07560	283 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	SES1	P07284	462 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	HMG2	P12684	1045 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	LAT1	P12695	482 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	DIT1	P21623	536 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	TEF4	P36008	412 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	OSH7	P38755	437 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	GDI1	P39958	451 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	ARF3	P40994	183 aa	RIP-Chip data	4.23	□□□□□ -1.73	RIP-Chip
SIP1	YDR422C	AAD10	P47182	288 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	TAF4	P50105	388 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	YGL036W	P53185	909 aa	Predicted RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	CUZ1	P53899	274 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	DBP9	Q06218	594 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	UAF30	Q08747	228 aa		4.23	□□□□□ -1.73
SIP1	YDR422C	LEU9	Q12166	604 aa	Known RBP	4.23	□□□□□ -1.73
SIP1	YDR422C	CDC24	P11433	854 aa	Predicted RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	FRS1	P15624	595 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	OM45	P16547	393 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	CRM1	P30822	1084 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	ALY1	P36117	915 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	UTP9	P38882	575 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	SER3	P40054	469 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	FTR1	P40088	404 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	LEM3	P42838	414 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	MRPS35	P53292	345 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	ORC4	P54791	529 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	TIM50	Q02776	476 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	YMR210W	Q03649	449 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	NOP6	Q07623	225 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	PRS5	Q12265	496 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	SFI1	Q12369	946 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	RPL1A	P0CX43	217 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	RPL1B	P0CX44	217 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	NIP1	P32497	812 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	SRP101	P32916	621 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	ARB1	P40024	610 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SIP1	YDR422C	ECM27	P47144	725 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	FMS1	P50264	508 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	ALT2	P52892	507 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	DOT1	Q04089	582 aa	Known RBP	4.22	□□□□□ -1.73
SIP1	YDR422C	SVS1	Q12254	260 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	ZRT2	Q12436	422 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	SFG1	Q12507	346 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	YOR111W	Q99210	232 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	YPT6	Q99260	215 aa		4.22	□□□□□ -1.73
SIP1	YDR422C	OCA4	P25366	362 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	SMI1	P32566	505 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	YEL043W	P32618	956 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	POA1	P38218	177 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	CEM1	P39525	442 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	BIT61	P47041	543 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	GLO1	P50107	326 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	PDR16	P53860	351 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	SMD2	Q06217	110 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	ARV1	Q06541	321 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	WHI4	Q07655	649 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	APC5	Q08683	685 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	BUD7	Q08754	746 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	CFT2	Q12102	859 aa	Predicted RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	NOP58	Q12499	511 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	SEC53	P07283	254 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	TUP1	P16649	713 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	CPR2	P23285	205 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	STE14	P32584	239 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	DEF1	P35732	738 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	YHR131C	P38835	850 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	CTF8	P38877	133 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	UBP7	P40453	1071 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	PFA3	P42836	336 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	VPS4	P52917	437 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	COS12	P53053	380 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	RAI1	P53063	387 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	ART5	P53244	586 aa	Known RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	SPO1	P53541	631 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	HST1	P53685	503 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SIP1	YDR422C	MUS81	Q04149	632 aa	Predicted RBP	4.21	□□□□□ -1.74
SIP1	YDR422C	MLH2	Q07980	695 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	UPC2	Q12151	913 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	TY1A-BL	Q12266	440 aa		4.21	□□□□□ -1.74
SIP1	YDR422C	SKM1	Q12469	655 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms