RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	CEX1	Q12453	761 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	ADH7	P25377	361 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	KAE1	P36132	386 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	GPI16	P38875	610 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	SMF1	P38925	575 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	RPS26A	P39938	119 aa	Known RBP	4.57	□□□□□ -1.68
RPN6	YDL097C	RPS26B	P39939	119 aa	Known RBP	4.57	□□□□□ -1.68
RPN6	YDL097C	VAC8	P39968	578 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	DSE1	P40077	573 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	DAS1	P47005	663 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	YJR079W	P47126	109 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	PRP24	P49960	444 aa	Known RBP	4.57	□□□□□ -1.68
RPN6	YDL097C	UBA2	P52488	636 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	NBP35	P52920	328 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	NNF2	P53253	936 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	YCS4	Q06156	1176 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	ATG10	Q07879	167 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	SLX4	Q12098	748 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	SVS1	Q12254	260 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	HSP42	Q12329	375 aa		4.57	□□□□□ -1.68
RPN6	YDL097C	CLN2	P20438	545 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	PPH21	P23594	369 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	EFB1	P32471	206 aa	Known RBP	4.56	□□□□□ -1.68
RPN6	YDL097C	MKK1	P32490	508 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	TYE7	P33122	291 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN6	YDL097C	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	QNS1	P38795	714 aa	Known RBP	4.56	□□□□□ -1.68
RPN6	YDL097C	CTM1	P38818	585 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	TIM17	P39515	158 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	MNT2	P53059	558 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	EMC4	P53073	190 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	VPS16	Q03308	798 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	MZM1	Q03429	123 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN6	YDL097C	CUR1	Q06469	252 aa		4.56	□□□□□ -1.68
RPN6	YDL097C	CSR1	Q06705	408 aa	Known RBP	4.56	□□□□□ -1.68
RPN6	YDL097C	GAL10	P04397	699 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	YEL076C-A	P0CX16	216 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	YLR464W	P0CX17	216 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	NAT1	P12945	854 aa	Known RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	DAL81	P21657	970 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	SBA1	P28707	216 aa	Known RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	CBF2	P32504	956 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	DYS1	P38791	387 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	YEL076C	P39971	216 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	FTR1	P40088	404 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	NUP82	P40368	713 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	BST1	P43571	1029 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	EPL1	P43572	832 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	GUP1	P53154	560 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	TRM112	P53738	135 aa	Predicted RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	EGD1	Q02642	157 aa	Known RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	TY1A-DR2	Q03964	440 aa	Known RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	SPG3	Q04398	127 aa	Predicted RBP	4.55	□□□□□ -1.68
RPN6	YDL097C	BSC2	Q05611	235 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	YDL218W	Q07629	317 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	PEX15	Q08215	383 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	HMI1	Q12039	706 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	HUA2	Q12134	243 aa		4.55	□□□□□ -1.68
RPN6	YDL097C	VAS1	P07806	1104 aa	Known RBP	4.54	□□□□□ -1.68
RPN6	YDL097C	SSA3	P09435	649 aa	Known RBP	4.54	□□□□□ -1.68
RPN6	YDL097C	MUD1	P32605	298 aa	Known RBP	4.54	□□□□□ -1.68
RPN6	YDL097C	LIP5	P32875	414 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RPN6	YDL097C	MTG2	P38860	518 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	HXT13	P39924	564 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	BUD6	P41697	788 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	HXT16	P47185	567 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	YRB30	P53107	440 aa	Predicted RBP	4.54	□□□□□ -1.68
RPN6	YDL097C	HXT17	P53631	564 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	YNL165W	P53891	406 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	INN1	P53901	409 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	HXT15	P54854	567 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	RSC4	Q02206	625 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	PMT7	Q06644	662 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RPN6	YDL097C	TIP41	Q12199	356 aa		4.54	□□□□□ -1.68
RPN6	YDL097C	CYC8	P14922	966 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	SAT4	P25333	603 aa	Known RBP	4.53	□□□□□ -1.68
RPN6	YDL097C	MLF3	P32047	452 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	SIN4	P32259	974 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	HEM12	P32347	362 aa	Predicted RBP	4.53	□□□□□ -1.68
RPN6	YDL097C	SEC6	P32844	805 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	PET112	P33893	541 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	QDR2	P40474	542 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	PHB1	P40961	287 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	ASK10	P48361	1146 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	COP1	P53622	1201 aa	Known RBP	4.53	□□□□□ -1.68
RPN6	YDL097C	YLR046C	Q12253	270 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	PRS5	Q12265	496 aa	Known RBP	4.53	□□□□□ -1.68
RPN6	YDL097C	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
RPN6	YDL097C	AI3	P03877	415 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	PHO8	P11491	566 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	MSB1	P21339	1137 aa	Known RBP	4.52	□□□□□ -1.69
RPN6	YDL097C	RNR1	P21524	888 aa	Known RBP	4.52	□□□□□ -1.69
RPN6	YDL097C	VPS1	P21576	704 aa	Known RBP	4.52	□□□□□ -1.69
RPN6	YDL097C	YCR006C	P25350	157 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	SNT1	P25357	1226 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	VBA3	P25594	458 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	PLC1	P32383	869 aa		4.52	□□□□□ -1.69
RPN6	YDL097C	YEL1	P34225	687 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms