RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	PRE2	P30656	287 aa	Known RBP	4.58	□□□□□ -1.68
RKM3	YBR030W	EFT1	P32324	842 aa	Known RBP	4.58	□□□□□ -1.68
RKM3	YBR030W	SAS3	P34218	831 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	MET12	P46151	657 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	VPS4	P52917	437 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	NCS6	P53088	359 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	YNR061C	P53747	219 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	RMT2	Q03305	412 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	RCN2	Q12044	265 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	GET3	Q12154	354 aa	Known RBP	4.58	□□□□□ -1.68
RKM3	YBR030W	ISA2	Q12425	185 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	GRX6	Q12438	231 aa		4.58	□□□□□ -1.68
RKM3	YBR030W	NOP58	Q12499	511 aa	Known RBP	4.58	□□□□□ -1.68
RKM3	YBR030W	ATP2	P00830	511 aa	Known RBP	4.57	□□□□□ -1.68
RKM3	YBR030W	CPA2	P03965	1118 aa	Known RBP	4.57	□□□□□ -1.68
RKM3	YBR030W	KAR3	P17119	729 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	ERG8	P24521	451 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	OCA4	P25366	362 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	AAD3	P25612	363 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	YBL029W	P38201	376 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	GCV2	P49095	1034 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	VCX1	Q99385	411 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	CTT1	P06115	562 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	SES1	P07284	462 aa	Known RBP	4.57	□□□□□ -1.68
RKM3	YBR030W	PEP3	P27801	918 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	BRF1	P29056	596 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	ALY1	P36117	915 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	SRO77	P38163	1010 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	AAD10	P47182	288 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	SGF73	P53165	657 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	GTF1	P53260	183 aa	Predicted RBP	4.57	□□□□□ -1.68
RKM3	YBR030W	MRPS35	P53292	345 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	ORC3	P54790	616 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	YPL108W	Q02872	168 aa	Predicted RBP	4.57	□□□□□ -1.68
RKM3	YBR030W	FDC1	Q03034	503 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	YML119W	Q03208	357 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	PLB2	Q03674	706 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	THI22	Q06490	572 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	TMA16	Q08687	178 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	TGL5	Q12043	749 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	YOL159C-A	Q3E769	90 aa		4.57	□□□□□ -1.68
RKM3	YBR030W	SOD2	P00447	233 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	CBS1	P14066	229 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	ADK2	P26364	225 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	CAP1	P28495	268 aa	Known RBP	4.56	□□□□□ -1.68
RKM3	YBR030W	GPI10	P30777	616 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	LYS9	P38999	446 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	YEL057C	P39983	233 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	ARB1	P40024	610 aa	Known RBP	4.56	□□□□□ -1.68
RKM3	YBR030W	DJP1	P40564	432 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	GPI8	P49018	411 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	NRG1	Q03125	231 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	GAD1	Q04792	585 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	STP3	Q05937	343 aa		4.56	□□□□□ -1.68
RKM3	YBR030W	HIS5	P07172	385 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	SEC12	P11655	471 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	PRE8	P23639	250 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	PEX1	P24004	1043 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	MNE1	P24720	663 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	DCG1	P32460	244 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	UBP13	P38187	747 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	TDP1	P38319	544 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	RPP1	P38786	293 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RKM3	YBR030W	MEP1	P40260	492 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	YIL166C	P40445	542 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	CHA4	P43634	648 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	COS12	P53053	380 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	PIL1	P53252	339 aa	Known RBP	4.55	□□□□□ -1.68
RKM3	YBR030W	NNF2	P53253	936 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	INN1	P53901	409 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	VPS9	P54787	451 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	CIK1	Q01649	594 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	NGL2	Q03264	515 aa	Known RBP	4.55	□□□□□ -1.68
RKM3	YBR030W	ARR3	Q06598	404 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	PEX19	Q07418	342 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	RIX7	Q07844	837 aa	Known RBP	4.55	□□□□□ -1.68
RKM3	YBR030W	YPL191C	Q08930	360 aa		4.55	□□□□□ -1.68
RKM3	YBR030W	PAR32	Q12515	295 aa	Known RBP	4.55	□□□□□ -1.68
RKM3	YBR030W	RPP2A	P05319	106 aa	Known RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	VPS33	P20795	691 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	SEC15	P22224	910 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	GCS1	P35197	352 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	GEX2	P36173	615 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	COS111	P38308	924 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	ETP1	P38748	585 aa	Known RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	LRO1	P40345	661 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	MET18	P40469	1032 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	YIL077C	P40508	320 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	MTL1	P53214	551 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	AIM32	Q04689	311 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	ECM22	Q05958	814 aa	Predicted RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	RGC1	Q06108	1083 aa	Known RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	DIA2	Q08496	732 aa	Predicted RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	NUS1	Q12063	375 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	PNO1	Q99216	274 aa	Known RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	STE50	P25344	346 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
RKM3	YBR030W	GCD7	P32502	381 aa	Predicted RBP	4.54	□□□□□ -1.68
RKM3	YBR030W	MDL1	P33310	695 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms