RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MYPNQ86TC9 1320 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 SSC5DA1L4H1 1573 aa6.96□□□□□ -1.29
HERC1-213ENST00000561359 CLRN2A0PK11 232 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 CFAP99D6REC4 459 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 LCE2BO14633 110 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 HTATSF1O43719 755 aaKnown RBP6.96□□□□□ -1.3
HERC1-213ENST00000561359 MYO1BO43795 1136 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 ATP2B4P23634 1241 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 WNT7BP56706 349 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 MAP3K12Q12852 859 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 CNGB1Q14028 1251 aaPredicted RBP6.96□□□□□ -1.3
HERC1-213ENST00000561359 CC2D1BQ5T0F9 858 aaKnown RBP6.96□□□□□ -1.3
HERC1-213ENST00000561359 STRIP1Q5VSL9 837 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 TTLL5Q6EMB2 1281 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 PTCRAQ6ISU1 281 aaPredicted RBP6.96□□□□□ -1.3
HERC1-213ENST00000561359 XAGE3Q8WTP9 111 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 MRGPRX2Q96LB1 330 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 DEFB118Q96PH6 123 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 VEZTQ9HBM0 779 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 SEC31BQ9NQW1 1179 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 EVA1BQ9NVM1 165 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 COL1A1P02452 1464 aaPredicted RBP6.96□□□□□ -1.3
HERC1-213ENST00000561359 XDHP47989 1333 aa6.96□□□□□ -1.3
HERC1-213ENST00000561359 LAMB2P55268 1798 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 BTBD19C9JJ37 291 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 IRS4O14654 1257 aaPredicted RBP6.95□□□□□ -1.3
HERC1-213ENST00000561359 CETPP11597 493 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 CTGFP29279 349 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 KCNH2Q12809 1159 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 QPCTQ16769 361 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 LRP10Q7Z4F1 713 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 SNIP1Q8TAD8 396 aaKnown RBP6.95□□□□□ -1.3
HERC1-213ENST00000561359 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
HERC1-213ENST00000561359 ZBED3Q96IU2 234 aaPredicted RBP6.95□□□□□ -1.3
HERC1-213ENST00000561359 CDX2Q99626 313 aaPredicted RBP6.95□□□□□ -1.3
HERC1-213ENST00000561359 TOR4AQ9NXH8 423 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 CPA4Q9UI42 421 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 CSADQ9Y600 493 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 ZNF804BA4D1E1 1349 aa6.95□□□□□ -1.3
HERC1-213ENST00000561359 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
HERC1-213ENST00000561359 NCOR1O75376 2440 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 ATP5J2-PTCD1G3V325 749 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 U2AF1L5P0DN76 240 aaPredicted RBP6.94□□□□□ -1.3
HERC1-213ENST00000561359 CAPN2P17655 700 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 SKOR1P84550 965 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 U2AF1Q01081 240 aaKnown RBP eCLIP6.94□□□□□ -1.33e-7■□□□□ 8.8
HERC1-213ENST00000561359 PRKCZQ05513 592 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 VGLL4Q14135 290 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 RASA3Q14644 834 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 C17orf99Q6UX52 265 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 LYPD8Q6UX82 237 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 FAM117AQ9C073 453 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 ZCCHC17Q9NP64 241 aaKnown RBP6.94□□□□□ -1.3
HERC1-213ENST00000561359 NUDCQ9Y266 331 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 LAMB4A4D0S4 1761 aa6.94□□□□□ -1.3
HERC1-213ENST00000561359 ADCY3O60266 1144 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 INHAP05111 366 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 ELNP15502 786 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 FCGRTP55899 365 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 GTF2IP78347 998 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
HERC1-213ENST00000561359 ANKRD18AQ8IVF6 992 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 CFAP53Q96M91 514 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
HERC1-213ENST00000561359 COA1Q9GZY4 146 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 PCDHAC2Q9Y5I4 1007 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 FAM205AQ6ZU69 1335 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 COL4A1P02462 1669 aa6.93□□□□□ -1.3
HERC1-213ENST00000561359 COL3A1P02461 1466 aaPredicted RBP6.92□□□□□ -1.3
HERC1-213ENST00000561359 ZSWIM8A7E2V4 1837 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 F8W031 263 aaPredicted RBP6.92□□□□□ -1.3
HERC1-213ENST00000561359 LILRB3O75022 631 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
HERC1-213ENST00000561359 FOSL2P15408 326 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 RBM5P52756 815 aaKnown RBP eCLIP6.92□□□□□ -1.3
HERC1-213ENST00000561359 EIF4G2P78344 907 aaKnown RBP eCLIP6.92□□□□□ -1.3
HERC1-213ENST00000561359 CFAP100Q494V2 611 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 ZNF787Q6DD87 383 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 BAP1Q92560 729 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 PAK6Q9NQU5 681 aaPredicted RBP6.92□□□□□ -1.3
HERC1-213ENST00000561359 GABRQQ9UN88 632 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 ADGRA2Q96PE1 1338 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 MED23Q9ULK4 1368 aa6.92□□□□□ -1.3
HERC1-213ENST00000561359 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 NEFMP07197 916 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 HSPA5P11021 654 aaKnown RBP6.91□□□□□ -1.3
HERC1-213ENST00000561359 SH3BP2P78314 561 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 TNFAIP1Q13829 316 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 MTMR14Q8NCE2 650 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 SNX27Q96L92 541 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 PRMT6Q96LA8 375 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms