RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
PABPC1-216ENST00000520868 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 MED14O60244 1454 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 ARHGEF5Q12774 1597 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 VWDEQ8N2E2 1590 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
PABPC1-216ENST00000520868 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
PABPC1-216ENST00000520868 PDIA4P13667 645 aaKnown RBP9.05□□□□□ -0.96
PABPC1-216ENST00000520868 LTKP29376 864 aa9.05□□□□□ -0.96
PABPC1-216ENST00000520868 POU4F3Q15319 338 aa9.05□□□□□ -0.96
PABPC1-216ENST00000520868 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
PABPC1-216ENST00000520868 RRP7BPQ9NSQ0 103 aa9.05□□□□□ -0.96
PABPC1-216ENST00000520868 ABCC3O15438 1527 aa9.05□□□□□ -0.96
PABPC1-216ENST00000520868 MED1Q15648 1581 aaPredicted RBP9.04□□□□□ -0.96
PABPC1-216ENST00000520868 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 BMP3P12645 472 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 MAOBP27338 520 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 SSTR4P31391 388 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 AP3B2Q13367 1082 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 DTHD1Q6ZMT9 781 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 FBF1Q8TES7 1133 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 CORO1BQ9BR76 489 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 LRRC7Q96NW7 1537 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 VPS8Q8N3P4 1428 aa9.04□□□□□ -0.96
PABPC1-216ENST00000520868 ERVK-7P63135 1459 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 MED26O95402 600 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 TIAF1O95411 115 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 ECEL1O95672 775 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 TGFB1P01137 390 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 DRD2P14416 443 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 BEND4Q6ZU67 534 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
PABPC1-216ENST00000520868 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.975e-11■■■■■ 39.1
PABPC1-216ENST00000520868 SGO2Q562F6 1265 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 FAM83CQ9BQN1 747 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 MYOM3Q5VTT5 1437 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 DEPDC5O75140 1603 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 ALKQ9UM73 1620 aa9.02□□□□□ -0.97
PABPC1-216ENST00000520868 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
PABPC1-216ENST00000520868 IQGAP1P46940 1657 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 MAPK8P45983 427 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 FCGRTP55899 365 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
PABPC1-216ENST00000520868 ATP2B2Q01814 1243 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 NFIAQ12857 509 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
PABPC1-216ENST00000520868 RNF43Q68DV7 783 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 ZDHHC13Q8IUH4 622 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 TRIM56Q9BRZ2 755 aaKnown RBP9.01□□□□□ -0.97
PABPC1-216ENST00000520868 MAST1Q9Y2H9 1570 aa9.01□□□□□ -0.97
PABPC1-216ENST00000520868 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
PABPC1-216ENST00000520868 KIF15Q9NS87 1388 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 KRTAP9-1A8MXZ3 250 aaPredicted RBP9□□□□□ -0.97
PABPC1-216ENST00000520868 PPP2R3AQ06190 1150 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 SOX4Q06945 474 aaPredicted RBP9□□□□□ -0.97
PABPC1-216ENST00000520868 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 DBNDD2Q9BQY9 259 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 YIPF2Q9BWQ6 316 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 SRCIN1Q9C0H9 1055 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 RAD18Q9NS91 495 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 SCAF11Q99590 1463 aaKnown RBP9□□□□□ -0.97
PABPC1-216ENST00000520868 DUOX2Q9NRD8 1548 aa9□□□□□ -0.97
PABPC1-216ENST00000520868 STRCP1A6NGW2 1772 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 ABCC5O15440 1437 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 MROH1Q8NDA8 1641 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 MAP4P27816 1152 aaKnown RBP8.99□□□□□ -0.97
PABPC1-216ENST00000520868 RXRBP28702 533 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 USP11P51784 963 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 IDI1Q13907 227 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 NBPF11Q86T75 865 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 SHISA5Q8N114 240 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 SLC26A8Q96RN1 970 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 KANK1Q14678 1352 aa8.99□□□□□ -0.97
PABPC1-216ENST00000520868 CEP152O94986 1710 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 GIPC1O14908 333 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 ADH5P11766 374 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 NXPE4Q6UWF7 544 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 AEBP1Q8IUX7 1158 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 TMEM39AQ9NV64 488 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 RGS17Q9UGC6 210 aaPredicted RBP8.98□□□□□ -0.97
PABPC1-216ENST00000520868 GPN3Q9UHW5 284 aaPredicted RBP8.98□□□□□ -0.97
PABPC1-216ENST00000520868 EIF2AK4Q9P2K8 1649 aaKnown RBP8.98□□□□□ -0.97
PABPC1-216ENST00000520868 TMEM2Q9UHN6 1383 aa8.98□□□□□ -0.97
PABPC1-216ENST00000520868 ZC3H13Q5T200 1668 aaKnown RBP8.97□□□□□ -0.97
PABPC1-216ENST00000520868 ARHGAP31Q2M1Z3 1444 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 UBR1Q8IWV7 1749 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 ARHGAP23Q9P227 1491 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 KCNA6P17658 529 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 ZNF157P51786 506 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-216ENST00000520868 FAAP100Q0VG06 881 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
PABPC1-216ENST00000520868 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
PABPC1-216ENST00000520868 C2CD4AQ8NCU7 369 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms