RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 DIS3L2Q8IYB7 885 aaKnown RBP13.85□□□□□ -0.19
HCN3-204ENST00000496230 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
HCN3-204ENST00000496230 FOXN1O15353 648 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 CASP1P29466 404 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 CDC25AP30304 524 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 LRMPQ12912 555 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 ESR2Q92731 530 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 KRT23Q9C075 422 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 RFX7Q2KHR2 1363 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 TRIM22Q8IYM9 498 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 PROM2Q8N271 834 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 TSC1Q92574 1164 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.19
HCN3-204ENST00000496230 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
HCN3-204ENST00000496230 ADAMTS3O15072 1205 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 PLCD1P51178 756 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 TFAP4Q01664 338 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.19
HCN3-204ENST00000496230 ANO1Q5XXA6 986 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.19
HCN3-204ENST00000496230 DCP1AQ9NPI6 582 aaPredicted RBP13.83□□□□□ -0.19
HCN3-204ENST00000496230 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.19
HCN3-204ENST00000496230 PTGS1P23219 599 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 MFSD14BQ5SR56 506 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 USP49Q70CQ1 688 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
HCN3-204ENST00000496230 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.2
HCN3-204ENST00000496230 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 DDR1Q08345 913 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 TXNRD1Q16881 649 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
HCN3-204ENST00000496230 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 EARS2Q5JPH6 523 aaKnown RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 AOPEPQ8N6M6 819 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 ZSCAN10Q96SZ4 725 aaPredicted RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 PLIN2Q99541 437 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 RCOR1Q9UKL0 485 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
HCN3-204ENST00000496230 PNOCQ13519 176 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 SNW1Q13573 536 aaKnown RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 ZNF174Q15697 407 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 NTRK3Q16288 839 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
HCN3-204ENST00000496230 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
HCN3-204ENST00000496230 TCP10Q12799 353 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
HCN3-204ENST00000496230 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
HCN3-204ENST00000496230 PLEKHG2Q9H7P9 1386 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 ZNF202O95125 648 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 STAG2Q8N3U4 1231 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 CNNM2Q9H8M5 875 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 WNT7AO00755 349 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 PFKFB1P16118 471 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 CLCN1P35523 988 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 ST5P78524 1137 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 GRAPQ13588 217 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
HCN3-204ENST00000496230 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
HCN3-204ENST00000496230 FAM200AQ8TCP9 573 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 FUCA2Q9BTY2 467 aa13.81□□□□□ -0.2
HCN3-204ENST00000496230 DDX19AQ9NUU7 478 aaKnown RBP13.81□□□□□ -0.2
HCN3-204ENST00000496230 MROH7-TTC4A0A0A0MT08 1334 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 LAMA4Q16363 1823 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 CDKL5O76039 1030 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 LETM1O95202 739 aaPredicted RBP13.8□□□□□ -0.2
HCN3-204ENST00000496230 AFMP43652 599 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 ANKRD2Q9GZV1 360 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 GNAT2P19087 354 aa13.8□□□□□ -0.2
HCN3-204ENST00000496230 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
HCN3-204ENST00000496230 RNF41Q9H4P4 317 aaPredicted RBP13.8□□□□□ -0.2
HCN3-204ENST00000496230 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
HCN3-204ENST00000496230 RRP9O43818 475 aaKnown RBP13.79□□□□□ -0.2
HCN3-204ENST00000496230 MMP10P09238 476 aa13.79□□□□□ -0.2
HCN3-204ENST00000496230 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
HCN3-204ENST00000496230 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
HCN3-204ENST00000496230 CCDC39Q9UFE4 941 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms