RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 WDR33Q9C0J8 1336 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 MEIS1O00470 390 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 KDM1AO60341 852 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 TBC1D12O60347 775 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 KHDRBS3O75525 346 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 ZC3H6P61129 1189 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF280BQ86YH2 543 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 AP1S3Q96PC3 154 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 RAD21L1Q9H4I0 556 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 PYGBP11216 843 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 SLC10A5Q5PT55 438 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 LRRC59Q96AG4 307 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF496Q96IT1 587 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 KIF9Q9HAQ2 790 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 GRPEL1Q9HAV7 217 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 MRPL12P52815 198 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 OCRLQ01968 901 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TMTC4Q5T4D3 741 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 BICDL1Q6ZP65 573 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PAXIP1Q6ZW49 1069 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ANO5Q75V66 913 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 STX12Q86Y82 276 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DTNBP1Q96EV8 351 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CNBD2Q96M20 576 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CDC5LQ99459 802 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF148Q9UQR1 794 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 APOBEC2Q9Y235 224 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZEB2O60315 1214 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 GNL1P36915 607 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ATP2B2Q01814 1243 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC42Q96M95 316 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 SPZ1Q9BXG8 430 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CNGB3Q9NQW8 809 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PARVAQ9NVD7 372 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ATAD3AQ9NVI7 634 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 U2AF1L5P0DN76 240 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CAPN2P17655 700 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DDX5P17844 614 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TRPC1P48995 793 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 U2AF1Q01081 240 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZRANB3Q5FWF4 1079 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 C7orf25Q9BPX7 421 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DSEQ9UL01 958 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 IQANK1A0A1B0GTG1 560 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 MAP3K7O43318 606 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 GNAI3P08754 354 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 KRT13P13646 458 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PSMC6P62333 389 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 BTN3A2P78410 334 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 KRT71Q3SY84 523 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CEP55Q53EZ4 464 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 SRLQ86TD4 932 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 SIRT1Q96EB6 747 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 NAPBQ9H115 298 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DDX28Q9NUL7 540 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZSCAN9O15535 394 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC130P13994 396 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 S100A1P23297 94 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ECE1P42892 770 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DHX9Q08211 1270 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PPWD1Q96BP3 646 aaKnown RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 OTUB1Q96FW1 271 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF830Q96NB3 372 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TSGA10Q9BZW7 698 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PARVGQ9HBI0 331 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CYP46A1Q9Y6A2 500 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DKC1O60832 514 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CYLC1P35663 651 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ARL3P36405 182 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 EVA1CP58658 441 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 WASHC5Q12768 1159 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ASPHQ12797 758 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TRAF1Q13077 416 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ANO4Q32M45 955 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 ARL13BQ3SXY8 428 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 SGO2Q562F6 1265 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 C6orf118Q5T5N4 469 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 EFCAB2Q5VUJ9 269 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 USP48Q86UV5 1035 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 MICAL1Q8TDZ2 1067 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 PARD3BQ8TEW8 1205 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 GIPC2Q8TF65 315 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 DPF3Q92784 378 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 FRMD6Q96NE9 622 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TRERF1Q96PN7 1200 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 EDEM3Q9BZQ6 932 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 KRT82Q9NSB4 513 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 CCPG1Q9ULG6 757 aa5.07□□□□□ -1.6
PTPN13-202ENST00000411767 TK2O00142 265 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 RASSF7Q02833 373 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 GRSF1Q12849 480 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ANKRD20A3Q5VUR7 823 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 VSIG1Q86XK7 387 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 NBPF15Q8N660 670 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 SCG3Q8WXD2 468 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms