RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ESR2Q92731 530 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 NEO1Q92859 1461 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 PIK3AP1Q6ZUJ8 805 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 SLC35F6Q8N357 371 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 UIMC1Q96RL1 719 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.47■□□□□ 0.07
SGMS1-202ENST00000361781 MMRN2Q9H8L6 949 aa15.47■□□□□ 0.07
SGMS1-202ENST00000361781 SHTN1A0MZ66 631 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 SLFN14P0C7P3 912 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 MRPS25P82663 173 aaKnown RBP15.46■□□□□ 0.07
SGMS1-202ENST00000361781 CNGA4Q8IV77 575 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 PHKA1P46020 1223 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 MNAT1P51948 309 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 ST5P78524 1137 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 SCARF1Q14162 830 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 ZNF609O15014 1411 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 PAFAH1B1P43034 410 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 SDR42E1Q8WUS8 393 aa15.46■□□□□ 0.07
SGMS1-202ENST00000361781 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.06
SGMS1-202ENST00000361781 SOGA3Q5TF21 947 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 VSTM4Q8IW00 320 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 UBE2Q2LH0YL09 131 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 GTF2A1P52655 376 aaPredicted RBP15.45■□□□□ 0.06
SGMS1-202ENST00000361781 CNNM2Q9H8M5 875 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 FAN1Q9Y2M0 1017 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 ARAP3Q8WWN8 1544 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 PRKAB2O43741 272 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
SGMS1-202ENST00000361781 KRT2P35908 639 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 RBL2Q08999 1139 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 TMEM87BQ96K49 555 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 OSBPL5Q9H0X9 879 aaPredicted RBP15.45■□□□□ 0.06
SGMS1-202ENST00000361781 CSRNP2Q9H175 543 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 PCDHB6Q9Y5E3 794 aa15.45■□□□□ 0.06
SGMS1-202ENST00000361781 GOLGA6L10A6NI86 522 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 ZPR1O75312 459 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 FDPSP14324 419 aaKnown RBP15.44■□□□□ 0.06
SGMS1-202ENST00000361781 PDE6AP16499 860 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 TTC19Q6DKK2 380 aaPredicted RBP15.44■□□□□ 0.06
SGMS1-202ENST00000361781 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 MAN1B1Q9UKM7 699 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 USO1O60763 962 aaKnown RBP15.44■□□□□ 0.06
SGMS1-202ENST00000361781 EPSTI1Q96J88 318 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 G3V3G9 751 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 STX10O60499 249 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 ASIC1P78348 528 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 NYAP1Q6ZVC0 841 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 NBPF11Q86T75 865 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 IFT81Q8WYA0 676 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 WWC3Q9ULE0 1092 aa15.44■□□□□ 0.06
SGMS1-202ENST00000361781 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 IVLP07476 585 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 CCDC42Q96M95 316 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 REREQ9P2R6 1566 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 ZMYM6O95789 1325 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 IKBKBO14920 756 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 TEX33O43247 280 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 DEXIO95424 95 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 SHC4Q6S5L8 630 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
SGMS1-202ENST00000361781 GREM2Q9H772 168 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 KIF5AQ12840 1032 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 SEPT11Q9NVA2 429 aaKnown RBP15.43■□□□□ 0.06
SGMS1-202ENST00000361781 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
SGMS1-202ENST00000361781 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 CDC27P30260 824 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 TBC1D8BQ0IIM8 1120 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 IKQ13123 557 aaPredicted RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 USP42Q9H9J4 1324 aaKnown RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 PSMA7O14818 248 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 KRT86O43790 486 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 CYLC1P35663 651 aaPredicted RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 NCAPH2Q6IBW4 605 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 TAX1BP1Q86VP1 789 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 ENGASEQ8NFI3 743 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 CEP89Q96ST8 783 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 ADAM21Q9UKJ8 722 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 CEP170BQ9Y4F5 1589 aaPredicted RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 SPAG1Q07617 926 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
SGMS1-202ENST00000361781 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
SGMS1-202ENST00000361781 ANKRD13CQ8N6S4 541 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms