RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CUL7Q14999 1698 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 KRT2P35908 639 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 FAM169AQ9Y6X4 670 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 CFAP43Q8NDM7 1665 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 CARMIL2Q6F5E8 1435 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 HSPA8P11142 646 aaKnown RBP6.83□□□□□ -1.32
VCAN-203ENST00000343200 KRT4P19013 534 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 CATIPQ7Z7H3 387 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 MRPS27Q92552 414 aaKnown RBP6.83□□□□□ -1.32
VCAN-203ENST00000343200 TBC1D23Q9NUY8 699 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 HAUS2Q9NVX0 235 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 KRT8P05787 483 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 GNGT1P63211 74 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 PLCB3Q01970 1234 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 CAPN1P07384 714 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 CCT5P48643 541 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 PPM1FP49593 454 aaPredicted RBP6.83□□□□□ -1.32
VCAN-203ENST00000343200 FKBP4Q02790 459 aaKnown RBP eCLIP6.83□□□□□ -1.32
VCAN-203ENST00000343200 GNPTABQ3T906 1256 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 ATL3Q6DD88 541 aa6.83□□□□□ -1.32
VCAN-203ENST00000343200 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
VCAN-203ENST00000343200 TBCAO75347 108 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 WBP4O75554 376 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 GLRX3O76003 335 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 APBA1Q02410 837 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 GOLGA8FQ08AF8 430 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 GOLGA8DPQ0D2H9 430 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 VWA3BQ502W6 1294 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 BBOF1Q8ND07 529 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 CFAP36Q96G28 342 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 LRGUKQ96M69 825 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 LMOD1P29536 600 aaPredicted RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 HDAC4P56524 1084 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 RSBN1LQ6PCB5 846 aaPredicted RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TEX11Q8IYF3 940 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 SNX21Q969T3 373 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ZNF711Q9Y462 761 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 CAPN9O14815 690 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 UBA7P41226 1012 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 CWF19L2Q2TBE0 894 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 TSC1Q92574 1164 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 RMI1Q9H9A7 625 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 PDE11AQ9HCR9 933 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 DICER1Q9UPY3 1922 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 ZFC3H1O60293 1989 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 NPHP3Q7Z494 1330 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 SYNRGQ9UMZ2 1314 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ARHGAP6O43182 974 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ATP8B1O43520 1251 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ESRRBO95718 433 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 SLC44A4Q53GD3 710 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 DDX42Q86XP3 938 aaKnown RBP eCLIP6.82□□□□□ -1.32
VCAN-203ENST00000343200 CFAP61Q8NHU2 1237 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ANKRD2Q9GZV1 360 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 IFNKQ9P0W0 207 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 INTS1Q8N201 2190 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 HGSO14964 777 aaPredicted RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 CUL3Q13618 768 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TBC1D9Q6ZT07 1266 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TRIM58Q8NG06 486 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TCP11Q8WWU5 503 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 AIDAQ96BJ3 306 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 RRAGDQ9NQL2 400 aaPredicted RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 RWDD3Q9Y3V2 267 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ANGPTL3Q9Y5C1 460 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 APOA1P02647 267 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 PSMC1P62191 440 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 CCDC138Q96M89 665 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 GMEB1Q9Y692 573 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 MED12Q93074 2177 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 UNC13AQ9UPW8 1703 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TIAM1Q13009 1591 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 TTC4O95801 387 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 CHGBP05060 677 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 LAMB3Q13751 1172 aa6.82□□□□□ -1.32
VCAN-203ENST00000343200 MTCL1Q9Y4B5 1905 aaKnown RBP6.82□□□□□ -1.32
VCAN-203ENST00000343200 CHUKO15111 745 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 KARSQ15046 597 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 TMTC3Q6ZXV5 915 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 KIFAP3Q92845 792 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 SECISBP2LQ93073 1101 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 PHF3Q92576 2039 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 RHOBTB1O94844 696 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 DHX9Q08211 1270 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 GDPD2Q9HCC8 539 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TRPC1P48995 793 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ARID5AQ03989 594 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ANKFY1Q9P2R3 1169 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TMCC1O94876 653 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 KRT15P19012 456 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TRAF7Q6Q0C0 670 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TLK2Q86UE8 772 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TUBB6Q9BUF5 446 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms