RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 GTPBP4Q9BZE4 634 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 ME1P48163 572 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 CCT2P78371 535 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 ZNF589Q86UQ0 364 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 TDRD7Q8NHU6 1098 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 AATFQ9NY61 560 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 PPP1R12BO60237 982 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 BRD1O95696 1058 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 SYT1P21579 422 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 PICALMQ13492 652 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 STAG1Q8WVM7 1258 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 SPC25Q9HBM1 224 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 CRYBG1Q9Y4K1 1723 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 APOBRQ0VD83 1088 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 STX8Q9UNK0 236 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 B4E1Z4 1266 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 USP17L21D6R901 530 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 TM4SF1P30408 202 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 TTC14Q96N46 770 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 SEC62Q99442 399 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 GNA11P29992 359 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 PLS1Q14651 629 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 SBK1Q52WX2 424 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 CCDC183Q5T5S1 534 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 VGLL2Q8N8G2 317 aa9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-201ENST00000317968 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 USP17L3A6NCW0 530 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 USP17L4A6NCW7 530 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 BTDP43251 543 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 GALNT17Q6IS24 598 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 USP17L1Q7RTZ2 530 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 DGKHQ86XP1 1220 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 M0R2C6 588 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 KIF20AO95235 890 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 FOSBP53539 338 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 KANK3Q6NY19 840 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 STXBP4Q6ZWJ1 553 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 PUS7LQ9H0K6 701 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 PDCL3Q9H2J4 239 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 A0A0U1RQG5 324 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 hCG_1984214I3L0E3 225 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 MSNP26038 577 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 PPP4CP60510 307 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 COL23A1Q86Y22 540 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 ZNF713Q8N859 430 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 NUP62CLQ9H1M0 184 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 ZHX3Q9H4I2 956 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 GPHNQ9NQX3 736 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 POLRMTO00411 1230 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 LPXNO60711 386 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 IBSPP21815 317 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 CRY2Q49AN0 593 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 BCL2L12Q9HB09 334 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 NLRP5P59047 1200 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 RILPL1Q5EBL4 403 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 FOXP4Q8IVH2 680 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 MROH7-TTC4A0A0A0MT08 1334 aa9.82□□□□□ -0.84
PDLIM5-201ENST00000317968 FKBP1AP62942 108 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 MECOMQ03112 1051 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 STRIP1Q5VSL9 837 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 USP40Q9NVE5 1235 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 CCDC39Q9UFE4 941 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 ORC4O43929 436 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 TGFB2P61812 414 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 PDE4CQ08493 712 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 CAVIN1Q6NZI2 390 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 TSPY26PQ9H489 355 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 ATP2B1P20020 1258 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 GPSM2P81274 684 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 SRGNP10124 158 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 SUPT20HL1Q3ZLR7 823 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 NOD1Q9Y239 953 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 KIF4AO95239 1232 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 HHIPL2Q6UWX4 724 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 RRP36Q96EU6 259 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 TCEANC2Q96MN5 208 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 FAM205AQ6ZU69 1335 aa9.81□□□□□ -0.84
PDLIM5-201ENST00000317968 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 FOXD4L6Q3SYB3 417 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 FOXD4L3Q6VB84 417 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 TNMDQ9H2S6 317 aa9.8□□□□□ -0.84
PDLIM5-201ENST00000317968 ABT1Q9ULW3 272 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms