RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Dhx40Q6PE54 779 aaKnown RBP7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Dhx38Q80X98 1228 aa7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 U2af1l4Q8BGJ9 220 aa7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Kri1Q8VDQ9 704 aaKnown RBP7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ccer1Q9CQL2 403 aa7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Eif4enif1Q9EST3 983 aaKnown RBP7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Chaf1aQ9QWF0 911 aa7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 Cacna1sQ02789 1880 aa7.16□□□□□ -1.26
Lig4-202ENSMUST00000170033 4931408C20RikE9PWP9 1381 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Snrpa1P57784 255 aaKnown RBP7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Kcnb1Q03717 857 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Rtkn2Q14B46 604 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Recql4Q75NR7 1216 aaKnown RBP7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Zkscan8Q8BSL0 588 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ccdc150Q8CDI7 1110 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Trmt6Q8CE96 497 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Smc2Q8CG48 1191 aaKnown RBP7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Bclaf1Q8K019 919 aaKnown RBP7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Kcnk13Q8R1P5 405 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Trim11Q99PQ2 467 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Chmp3Q9CQ10 224 aa7.15□□□□□ -1.26
Lig4-202ENSMUST00000170033 Tpm1P58771 284 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Slc7a1Q09143 622 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tmem59lQ7TNI2 337 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccdc38Q8CDN8 563 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Naa30Q8CES0 364 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Polr3eQ9CZT4 710 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Stag1Q9D3E6 1258 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zbtb43Q9DAI4 467 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 PdiltQ9DAN1 588 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Myo1cQ9WTI7 1063 aa7.15□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zscan29E9Q5B4 869 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cops6O88545 324 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 F2rP30558 430 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Fez2Q6TYB5 348 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Bola3Q8CEI1 110 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rbm17Q8JZX4 405 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cgref1Q8R1U2 281 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Prl7d1P04769 244 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Fbln2P37889 1221 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tdo2P48776 406 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nat3P50296 290 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nxf7Q80SZ6 620 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Slitrk3Q810B9 980 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Hps6Q8BLY7 805 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccz1Q8C1Y8 480 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 4930550L24RikQ99PA7 320 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dpf1Q9QX66 387 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Stxbp4Q9WV89 557 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Myh4Q5SX39 1939 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Metap2O08663 478 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Calm1P0DP26 149 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Calm2P0DP27 149 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Calm3P0DP28 149 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tmem165P52875 323 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Anp32eP97822 260 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cdc37Q61081 379 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Spty2d1Q68FG3 682 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Bsdc1Q80Y55 427 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tcp11l1Q8BTG3 509 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ttc19Q8CC21 365 aa7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rbm6S4R1W5 1118 aaKnown RBP7.14□□□□□ -1.27
Lig4-202ENSMUST00000170033 Hmgb2P30681 210 aaKnown RBP7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Gpr182P43142 395 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nbr1P97432 988 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccdc174Q3U155 467 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nutm2Q3V0C3 733 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zbtb45Q52KG4 520 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tubb2aQ7TMM9 445 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 SowahdQ8BY98 327 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Zfp202Q8C879 641 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tceanc2Q8R2M0 207 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 SdsQ8VBT2 327 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cnot6lQ8VEG6 555 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Lrrc59Q922Q8 307 aaKnown RBP7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tubb2bQ9CWF2 445 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dusp10Q9ESS0 483 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 FliiQ9JJ28 1271 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cyp2d34L7N463 504 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cd3dP04235 173 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 OatP29758 439 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rfc1P35601 1131 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kmt5bQ3U8K7 883 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Taf3Q5HZG4 932 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Itga6Q61739 1091 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rbm12b2Q66JV4 834 aaKnown RBP7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kif1bpQ6ZPU9 617 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 LratQ9JI60 231 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Lmbr1Q9JIT0 490 aa7.13□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tbc1d8bA3KGB4 1114 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Vmn2r23E9PXI5 849 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ube4aE9Q735 1028 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Lnx1O70263 728 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Surf1P09925 306 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 SsbP32067 415 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccnl1Q52KE7 532 aaKnown RBP7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Sik1Q60670 779 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dcaf5Q80T85 946 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Olfm5Q8BU90 496 aa7.12□□□□□ -1.27
Lig4-202ENSMUST00000170033 Fam193aQ8CGI1 1231 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms