Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Gm25239-201ENSMUST00000174915 86 ntBASIC30.91■■■□□ 2.54
Trmt6Q8CE96 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Trmt6Q8CE96 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Trmt6Q8CE96 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trmt6Q8CE96 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trmt6Q8CE96 Psd-208ENSMUST00000224556 2034 ntBASIC28.56■■■□□ 2.16
Trmt6Q8CE96 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Trmt6Q8CE96 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Trmt6Q8CE96 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trmt6Q8CE96 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trmt6Q8CE96 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trmt6Q8CE96 Gm15042-201ENSMUST00000120212 883 ntBASIC27.45■■□□□ 1.98
Trmt6Q8CE96 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trmt6Q8CE96 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Trmt6Q8CE96 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trmt6Q8CE96 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trmt6Q8CE96 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.97■■□□□ 1.91
Trmt6Q8CE96 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trmt6Q8CE96 Gm15045-201ENSMUST00000117359 883 ntBASIC26.81■■□□□ 1.88
Trmt6Q8CE96 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Trmt6Q8CE96 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trmt6Q8CE96 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trmt6Q8CE96 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Trmt6Q8CE96 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trmt6Q8CE96 Gm24109-201ENSMUST00000175489 103 ntBASIC26.54■■□□□ 1.84
Trmt6Q8CE96 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trmt6Q8CE96 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trmt6Q8CE96 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Trmt6Q8CE96 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trmt6Q8CE96 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.16■■□□□ 1.78
Trmt6Q8CE96 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trmt6Q8CE96 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.09■■□□□ 1.77
Trmt6Q8CE96 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.08■■□□□ 1.77
Trmt6Q8CE96 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trmt6Q8CE96 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Trmt6Q8CE96 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trmt6Q8CE96 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trmt6Q8CE96 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trmt6Q8CE96 Gm23366-201ENSMUST00000175022 89 ntBASIC25.95■■□□□ 1.74
Trmt6Q8CE96 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.89■■□□□ 1.73
Trmt6Q8CE96 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trmt6Q8CE96 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trmt6Q8CE96 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trmt6Q8CE96 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trmt6Q8CE96 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trmt6Q8CE96 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trmt6Q8CE96 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trmt6Q8CE96 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.71■■□□□ 1.71
Trmt6Q8CE96 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trmt6Q8CE96 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.56■■□□□ 1.68
Trmt6Q8CE96 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trmt6Q8CE96 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Trmt6Q8CE96 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trmt6Q8CE96 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.48■■□□□ 1.67
Trmt6Q8CE96 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Trmt6Q8CE96 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Trmt6Q8CE96 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trmt6Q8CE96 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trmt6Q8CE96 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Trmt6Q8CE96 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trmt6Q8CE96 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.23■■□□□ 1.63
Trmt6Q8CE96 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trmt6Q8CE96 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trmt6Q8CE96 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trmt6Q8CE96 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trmt6Q8CE96 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trmt6Q8CE96 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Trmt6Q8CE96 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trmt6Q8CE96 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.01■■□□□ 1.59
Trmt6Q8CE96 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trmt6Q8CE96 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trmt6Q8CE96 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Trmt6Q8CE96 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trmt6Q8CE96 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trmt6Q8CE96 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trmt6Q8CE96 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trmt6Q8CE96 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trmt6Q8CE96 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Trmt6Q8CE96 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Trmt6Q8CE96 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trmt6Q8CE96 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trmt6Q8CE96 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trmt6Q8CE96 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Trmt6Q8CE96 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.55■■□□□ 1.52
Trmt6Q8CE96 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trmt6Q8CE96 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trmt6Q8CE96 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trmt6Q8CE96 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trmt6Q8CE96 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trmt6Q8CE96 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trmt6Q8CE96 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Trmt6Q8CE96 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Trmt6Q8CE96 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Trmt6Q8CE96 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Trmt6Q8CE96 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trmt6Q8CE96 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trmt6Q8CE96 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trmt6Q8CE96 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.32■■□□□ 1.48
Trmt6Q8CE96 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trmt6Q8CE96 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms