RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Q9D8Q6 235 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Igkv2-137A0A0B4J1H6 120 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 NpwA0A1L1STR8 176 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Zcchc24B2RVL6 241 aaKnown RBP5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Tcf15Q60756 195 aa5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Prrc2cQ3TLH4 2846 aaKnown RBP5.88□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Col4a4Q9QZR9 1682 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Psmb8P28063 276 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Atp5eP56382 52 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 BC106179Q8C9L1 186 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Rab1bQ9D1G1 201 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Dido1Q8C9B9 2256 aaKnown RBP5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 9830107B12RikD3Z5D6 160 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Prima1Q810F0 153 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Dpm2Q9Z324 84 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Col27a1Q5QNQ9 1845 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Cacna1hO88427 2365 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 C920008G01RikA0A0B4J1N1 112 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Foxi2Q3I5G5 311 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ovol2Q8CIV7 274 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Rnf183Q8QZS5 190 aa5.87□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Akap9Q70FJ1 3797 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Defa4P28311 92 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Trav21-dv12A0A075B6C4 109 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ndufa4l2Q4FZG9 87 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Atp5lQ9CPQ8 103 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Mfap4Q9D1H9 257 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Trbv17A0A140T8P8 114 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Onecut1O08755 465 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 P04944 107 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Folr2Q05685 251 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Lypd1Q8BLC3 141 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gvin1Q80SU7 2427 aa5.86□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ccl6P27784 116 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Cdx4Q07424 282 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ctsll3Q3ULP7 331 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Olfr553Q7TRS6 326 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Mrpl33Q9CQP0 65 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm35549A0A0N4SUS7 141 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 P01812 117 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Defa25Q5G864 92 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ss18Q62280 418 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Tff3Q62395 81 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 ScxQ64124 207 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 CnfnQ6PCW6 111 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Rasl11bQ922H7 247 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Trav7-6A0A075B640 112 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm10767Q3TQP0 103 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Morn5Q9DAI9 170 aa5.85□□□□□ -1.47
Bdnf-209ENSMUST00000111050 4930447F04RikA2AFR2 126 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm933J3QPC1 141 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Morn3Q8C5T4 241 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Ube2wQ8VDW4 151 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm26938S4R185 226 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Cnot1Q6ZQ08 2375 aaKnown RBP5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Tcf20Q9EPQ8 1987 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Igkv19-93A0A0G2JFZ3 115 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Igkv6-23A0A140T8N5 115 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm36368A0A1D5RLK8 91 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Pde6hP61249 83 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Cacna1aP97445 2368 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Gm17660B9UIU9 90 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 P01811 117 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 TtrP07309 147 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 AvpP35455 168 aa5.84□□□□□ -1.47
Bdnf-209ENSMUST00000111050 Trav19A0A0B4J1K4 119 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Igkv6-15A0A140T8M5 115 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm5089A1L3C8 106 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gp9O88186 177 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Zfp248Q640N4 576 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm10118Q8C8J5 116 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Cox6cQ9CPQ1 76 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Arpc1aQ9R0Q6 370 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Armcx4E9PWM3 2356 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Sptbn1Q62261 2363 aaKnown RBP5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Col6a6Q8C6K9 2265 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Olfr313Q5NC55 308 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Rps21Q9CQR2 83 aaKnown RBP5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Ormdl2Q9CQZ0 153 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Dmxl2Q8BPN8 3032 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm20726G3UX18 150 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Phlda3Q9WV95 125 aa5.83□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Sumo2P61957 95 aaKnown RBP5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Mllt11P97783 90 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Tex26Q0VB26 296 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Dmrt3Q80WT2 476 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Fhl4Q8CDC8 279 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gkn1Q9CR36 201 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Nup37Q9CWU9 326 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Zfhx2Q2MHN3 2562 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Arhgap32Q811P8 2089 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm29423A0A087WRM1 55 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm3618D3Z4P5 127 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Dynlrb1P62627 96 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 GalmQ8K157 342 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Wipf1Q8K1I7 493 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Gm2916Q9D9B9 127 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Slc25a15Q9WVD5 301 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Trav4n-4A0A075B615 110 aa5.82□□□□□ -1.48
Bdnf-209ENSMUST00000111050 Trbv13-1A0A0B4J1P8 112 aa5.82□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms