RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Igkv9-123A0A140T8N8 117 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm14444A2ARW3 426 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Zfp971A2BFG8 470 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Vmn1r78K7N608 313 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 B9d2Q3UK10 175 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm14137Q8CE97 175 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 OtosQ8R448 89 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Chchd5Q9CQP3 110 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Dock9Q8BIK4 2055 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Dock10Q8BZN6 2150 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Parp4E9PYK3 1969 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 1810010D01RikA0A1L1SR87 51 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm14399A2ARW8 610 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ear14F6YUX7 155 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Fxyd1Q9Z239 92 aa6.57□□□□□ -1.36
Upf3b-201ENSMUST00000076265 GhrhP16043 103 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ube2l3P68037 154 aaKnown RBP6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 TigarQ8BZA9 269 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ighv14-2A0A075B5R7 117 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav12d-3A0A075B6A4 115 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm20773A0A0A6YXW2 232 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm20807A0A0A6YXX7 232 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm20873J3QMQ9 232 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm21310J3QQ23 232 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm21440Q3TTD8 232 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Cnrip1Q5M8N0 164 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm16485Q8C4B7 115 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 S100a16Q9D708 124 aa6.56□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ighv5-12A0A075B5Q4 117 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Csn3P06796 181 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Rpl30P62889 115 aaKnown RBP6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav6d-4Q5R1I0 115 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Med12A2AGH6 2190 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ice1E9Q286 2241 aaKnown RBP6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Pom121l12A0A1B0GSJ4 278 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Tmem243B2RVB9 118 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 7530416G11RikJ3QJX6 159 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Hoxb6P09023 224 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Hist1h4aP62806 103 aaKnown RBP6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm10840Q3V2K9 103 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Vmn1r178Q8R2B6 304 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Wdr38Q9D994 303 aa6.55□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ccl21bP86792 133 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Ccl21cP86793 133 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 A930003A15RikQ3U552 87 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm10188Q3V432 135 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 H1fxQ80ZM5 188 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Tex36Q9D5N9 219 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav6-7-dv9A0A075B639 125 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav14-2A0A075B694 121 aa6.54□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Cacna1cQ01815 2139 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gcn1E9PVA8 2671 aaKnown RBP6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav6n-6A0A075B6B2 114 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 E030025P04RikA2A6V5 185 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm21913J3KML9 361 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 P01795 144 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Fgf12P61329 243 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Pcbd1P61458 104 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 BlcapP62951 87 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Slc25a22Q9D6M3 323 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 A0A286YCP9 139 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Smr3aQ61900 147 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm9958Q8C9U4 106 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Vmn1r73Q8R293 303 aa6.53□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Tep1P97499 2629 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Trav6n-7A0A075B6A6 116 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P01786 117 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ube2g1P62254 170 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Cdk2ap2Q9CPY4 127 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Pfn4Q9D6I3 129 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Hivep2Q3UHF7 2430 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Mast4Q811L6 2618 aa6.52□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ighv1-23A0A0A6YVW3 117 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm14288E9Q9W0 88 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P18530 117 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Higd1cQ76I25 96 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ndufa3Q9CQ91 84 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Rita1Q9D1H0 253 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Trank1Q8BV79 2999 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Heatr5bQ8C547 2070 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Trav8-1A0A075B641 109 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm17472A0A075B683 117 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 P04945 108 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm12888Q3UW77 119 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Cox7a2lQ61387 111 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Serp2Q6TAW2 65 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Rps27lQ6ZWY3 84 aaKnown RBP6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Rpp21Q8R040 150 aa6.51□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Igkv3-7A0A0G2JE31 119 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm42543A0A0G2JET4 117 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Igkv12-44A0A140T8M2 115 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm6993A0A1W2P738 69 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm10518F6UQQ9 182 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm15056F6ZR08 88 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Gm21732J3QM79 361 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 CgaP01216 120 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Saa4P31532 130 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Ndufs7Q9DC70 224 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Slc25a15Q9WVD5 301 aa6.5□□□□□ -1.37
Upf3b-201ENSMUST00000076265 Igkv3-10A0A0G2JGN0 119 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 141.1 ms