RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Wipf2Q6PEV3 440 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Rnf183Q8QZS5 190 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 MylkQ6PDN3 1941 aaKnown RBP5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm35549A0A0N4SUS7 141 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Vmo1Q5SXG7 201 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ramp1Q9WTJ5 148 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ighv3-8A0A075B5T0 131 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ighv8-2A0A0A6YW58 119 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Nxph4G3X9N5 304 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 P01643 108 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 P01786 117 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Atp5g3P56384 141 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Fhl1P97447 280 aaKnown RBP5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Spink8Q09TK9 105 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Atp5g1Q9CR84 136 aa5.94□□□□□ -1.46
Usp40-201ENSMUST00000040783 Dad1P61804 113 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 BC049762Q8C601 163 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm5105Q8C6Y9 112 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Higd1aQ9JLR9 95 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Parp4E9PYK3 1969 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 AcacbE9Q4Z2 2448 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm45521A0A1B0GRK0 198 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gpx1P11352 201 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Tcl1b4P56844 120 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Map6d1Q14BB9 191 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gemin7Q9CWY4 129 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Klf13Q9JJZ6 289 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Plekhb2Q9QZC7 221 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Notch4P31695 1964 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 A230072I06RikQ3UUJ8 172 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 RhohQ9D3G9 191 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Cspg4Q8VHY0 2327 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Med12A2AGH6 2190 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Spg11Q3UHA3 2430 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Lce6aD3YV94 81 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Plac1Q9JI83 173 aa5.93□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ighv1-4A0A075B5T4 117 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Reg3gO09049 174 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Igkv3-2A0A075B5P0 119 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Trav12-3A0A075B648 115 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ighv1-74A0A0G2JGK2 117 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 P04940 107 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 P04941 107 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Q9D8L0 127 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Cep350E9Q309 3095 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Tmem86bQ497J1 226 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm42715A0A087WP63 3095 aaKnown RBP5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Igkv3-1A0A075B5P1 119 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 P01811 117 aa5.92□□□□□ -1.46
Usp40-201ENSMUST00000040783 Wt1P22561 449 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Cfc1P97766 202 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Tex26Q0VB26 296 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Dopey1Q8BL99 2399 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Arhgap21Q6DFV3 1944 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Trav6-6A0A075B603 114 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 P01790 122 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 P18528 98 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ankrd39Q9D2X0 183 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 MyofQ69ZN7 2048 aaKnown RBP5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Unc80Q8BLN6 3261 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Rif1Q6PR54 2419 aaKnown RBP5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Ighv3-1A0A075B5S6 116 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Igkv8-34A0A0G2JDU0 121 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Prr3Q811B5 190 aaKnown RBP5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 BaalcQ8VHV1 145 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 CadB2RQC6 2225 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 P01787 123 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 9930022D16RikQ8BG27 128 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Wfdc2Q9DAU7 174 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Sdk2Q6V4S5 2176 aa5.91□□□□□ -1.46
Usp40-201ENSMUST00000040783 Trbv14A0A140T8L9 115 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Rpl32-psP17932 135 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Inafm1E9PV59 130 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm17455G3UW87 128 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 NpsP0C0P8 89 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Rbmy1bQ60990 380 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm17324Q8C6J8 137 aa5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Lsm4Q9QXA5 137 aaKnown RBP5.9□□□□□ -1.46
Usp40-201ENSMUST00000040783 Gm33815A0A087WNV3 176 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm10638F6QEG2 257 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 P01738 130 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Igll1P20764 209 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Pex7P97865 318 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Synj2bpQ9D6K5 145 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 E030018B13RikJ3QMS9 113 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Vpreb2P13373 142 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 9130230L23RikQ8CC80 163 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Cyyr1Q8VIH7 165 aa5.9□□□□□ -1.47
Usp40-201ENSMUST00000040783 Iglc1A0A0G2JE99 106 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Eid2bE9Q2Y0 151 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gm815Q3UWS2 115 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Tm2d1Q99MB3 208 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Gtsf1lQ9CWD0 151 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Mrpl53Q9D1H8 118 aaKnown RBP5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Dnah12Q3V0Q1 3086 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Ighv1-52A0A0A6YXC3 117 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Pla2g2cP48076 150 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Prop1P97458 223 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Card19Q9D1I2 183 aa5.89□□□□□ -1.47
Usp40-201ENSMUST00000040783 Wnk1P83741 2377 aa5.89□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms