RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PHGDH-217ENST00000641455 MT1GP13640 62 aa2.86□□□□□ -1.95
PHGDH-217ENST00000641455 Q1T7F1 81 aa2.84□□□□□ -1.95
PHGDH-217ENST00000641455 V9GYY9 64 aa2.84□□□□□ -1.95
PHGDH-217ENST00000641455 SPANXA2-OT1Q8N9U9 137 aa2.83□□□□□ -1.96
PHGDH-217ENST00000641455 MT1MQ8N339 61 aa2.82□□□□□ -1.96
PHGDH-217ENST00000641455 SEC61GP60059 68 aa2.8□□□□□ -1.96
PHGDH-217ENST00000641455 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
PHGDH-217ENST00000641455 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
PHGDH-217ENST00000641455 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
PHGDH-217ENST00000641455 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
PHGDH-217ENST00000641455 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
PHGDH-217ENST00000641455 MT1LQ93083 61 aa2.73□□□□□ -1.97
PHGDH-217ENST00000641455 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PHGDH-217ENST00000641455 A0A0D9SG42 100 aa2.72□□□□□ -1.97
PHGDH-217ENST00000641455 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
PHGDH-217ENST00000641455 PSPHP1O15172 72 aa2.71□□□□□ -1.98
PHGDH-217ENST00000641455 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
PHGDH-217ENST00000641455 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
PHGDH-217ENST00000641455 COA5Q86WW8 74 aa2.7□□□□□ -1.98
PHGDH-217ENST00000641455 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
PHGDH-217ENST00000641455 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
PHGDH-217ENST00000641455 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
PHGDH-217ENST00000641455 PRR15LQ9BU68 103 aa2.67□□□□□ -1.98
PHGDH-217ENST00000641455 CDC42SE1Q9NRR8 79 aa2.67□□□□□ -1.98
PHGDH-217ENST00000641455 A0A1B0GU33 70 aa2.65□□□□□ -1.99
PHGDH-217ENST00000641455 A6NED7 52 aa2.65□□□□□ -1.99
PHGDH-217ENST00000641455 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
PHGDH-217ENST00000641455 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
PHGDH-217ENST00000641455 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PHGDH-217ENST00000641455 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
PHGDH-217ENST00000641455 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
PHGDH-217ENST00000641455 A0A1B0GU69 56 aa2.6□□□□□ -1.99
PHGDH-217ENST00000641455 A8MU10 97 aa2.58□□□□□ -2
PHGDH-217ENST00000641455 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
PHGDH-217ENST00000641455 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
PHGDH-217ENST00000641455 KRTAP5-8O75690 187 aa2.57□□□□□ -2
PHGDH-217ENST00000641455 TNP1P09430 55 aa2.56□□□□□ -2
PHGDH-217ENST00000641455 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
PHGDH-217ENST00000641455 UQCR11O14957 56 aa2.55□□□□□ -2
PHGDH-217ENST00000641455 KRTAP12-1P59990 96 aa2.55□□□□□ -2
PHGDH-217ENST00000641455 LCE3AQ5TA76 89 aa2.53□□□□□ -2
PHGDH-217ENST00000641455 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
PHGDH-217ENST00000641455 H3BS24 57 aa2.51□□□□□ -2.01
PHGDH-217ENST00000641455 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
PHGDH-217ENST00000641455 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
PHGDH-217ENST00000641455 K7ERS5 55 aa2.43□□□□□ -2.02
PHGDH-217ENST00000641455 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
PHGDH-217ENST00000641455 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
PHGDH-217ENST00000641455 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
PHGDH-217ENST00000641455 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
PHGDH-217ENST00000641455 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
PHGDH-217ENST00000641455 MT1AP04731 61 aa2.32□□□□□ -2.04
PHGDH-217ENST00000641455 ROMO1P60602 79 aa2.32□□□□□ -2.04
PHGDH-217ENST00000641455 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
PHGDH-217ENST00000641455 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PHGDH-217ENST00000641455 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PHGDH-217ENST00000641455 KRTAP23-1A1A580 65 aa2.27□□□□□ -2.05
PHGDH-217ENST00000641455 KRTAP15-1Q3LI76 137 aa2.23□□□□□ -2.05
PHGDH-217ENST00000641455 LCE3CQ5T5A8 94 aa2.19□□□□□ -2.06
PHGDH-217ENST00000641455 MT3P25713 68 aa2.15□□□□□ -2.07
PHGDH-217ENST00000641455 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
PHGDH-217ENST00000641455 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PHGDH-217ENST00000641455 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
PHGDH-217ENST00000641455 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
PHGDH-217ENST00000641455 LUZP6Q538Z0 58 aa2□□□□□ -2.09
PHGDH-217ENST00000641455 A0A0A0MQY5 61 aa1.95□□□□□ -2.1
PHGDH-217ENST00000641455 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
PHGDH-217ENST00000641455 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
PHGDH-217ENST00000641455 INE1O15225 51 aa1.79□□□□□ -2.12
PHGDH-217ENST00000641455 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
PHGDH-217ENST00000641455 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
PHGDH-217ENST00000641455 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PHGDH-217ENST00000641455 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
PHGDH-217ENST00000641455 LCE3EQ5T5B0 92 aa1.49□□□□□ -2.17
PHGDH-217ENST00000641455 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
PHGDH-217ENST00000641455 PRM1P04553 51 aa1.19□□□□□ -2.22
PHGDH-217ENST00000641455 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms