RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
PDE4D-229ENST00000638939 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
PDE4D-229ENST00000638939 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
PDE4D-229ENST00000638939 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
PDE4D-229ENST00000638939 CYSTM1Q9H1C7 97 aa2.03□□□□□ -2.08
PDE4D-229ENST00000638939 ACYP2P14621 99 aa2.02□□□□□ -2.09
PDE4D-229ENST00000638939 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
PDE4D-229ENST00000638939 SMIM20Q8N5G0 67 aa2.02□□□□□ -2.09
PDE4D-229ENST00000638939 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
PDE4D-229ENST00000638939 MT1GP13640 62 aa2□□□□□ -2.09
PDE4D-229ENST00000638939 PP632Q6XCG6 107 aa2□□□□□ -2.09
PDE4D-229ENST00000638939 KRTAP13-4Q3LI77 160 aa1.99□□□□□ -2.09
PDE4D-229ENST00000638939 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
PDE4D-229ENST00000638939 CHKB-CPT1BH3BT56 60 aa1.98□□□□□ -2.09
PDE4D-229ENST00000638939 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
PDE4D-229ENST00000638939 MT4P47944 62 aa1.98□□□□□ -2.09
PDE4D-229ENST00000638939 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
PDE4D-229ENST00000638939 MT1MQ8N339 61 aa1.97□□□□□ -2.09
PDE4D-229ENST00000638939 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
PDE4D-229ENST00000638939 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
PDE4D-229ENST00000638939 A0A0D9SG42 100 aa1.95□□□□□ -2.1
PDE4D-229ENST00000638939 MT1LQ93083 61 aa1.94□□□□□ -2.1
PDE4D-229ENST00000638939 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PDE4D-229ENST00000638939 J3QR89 54 aa1.92□□□□□ -2.1
PDE4D-229ENST00000638939 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
PDE4D-229ENST00000638939 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
PDE4D-229ENST00000638939 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
PDE4D-229ENST00000638939 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
PDE4D-229ENST00000638939 A0A1B0GV90 55 aa1.87□□□□□ -2.11
PDE4D-229ENST00000638939 C10orf95Q9H7T3 257 aa1.87□□□□□ -2.11
PDE4D-229ENST00000638939 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
PDE4D-229ENST00000638939 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
PDE4D-229ENST00000638939 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
PDE4D-229ENST00000638939 SPATA8Q6RVD6 105 aa1.86□□□□□ -2.11
PDE4D-229ENST00000638939 SERP1Q9Y6X1 66 aa1.86□□□□□ -2.11
PDE4D-229ENST00000638939 Q1T7F1 81 aa1.85□□□□□ -2.11
PDE4D-229ENST00000638939 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
PDE4D-229ENST00000638939 COA5Q86WW8 74 aa1.85□□□□□ -2.11
PDE4D-229ENST00000638939 TNP1P09430 55 aa1.83□□□□□ -2.12
PDE4D-229ENST00000638939 SERP2Q8N6R1 65 aa1.81□□□□□ -2.12
PDE4D-229ENST00000638939 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
PDE4D-229ENST00000638939 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
PDE4D-229ENST00000638939 K7ERU9 68 aa1.78□□□□□ -2.12
PDE4D-229ENST00000638939 ROMO1P60602 79 aa1.77□□□□□ -2.13
PDE4D-229ENST00000638939 A0A1B0GU69 56 aa1.76□□□□□ -2.13
PDE4D-229ENST00000638939 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
PDE4D-229ENST00000638939 H7BZZ5 65 aa1.72□□□□□ -2.13
PDE4D-229ENST00000638939 COX7CP15954 63 aa1.72□□□□□ -2.13
PDE4D-229ENST00000638939 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
PDE4D-229ENST00000638939 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
PDE4D-229ENST00000638939 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
PDE4D-229ENST00000638939 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
PDE4D-229ENST00000638939 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
PDE4D-229ENST00000638939 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
PDE4D-229ENST00000638939 INE1O15225 51 aa1.67□□□□□ -2.14
PDE4D-229ENST00000638939 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
PDE4D-229ENST00000638939 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
PDE4D-229ENST00000638939 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
PDE4D-229ENST00000638939 CDC42SE1Q9NRR8 79 aa1.66□□□□□ -2.14
PDE4D-229ENST00000638939 MT1AP04731 61 aa1.65□□□□□ -2.15
PDE4D-229ENST00000638939 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
PDE4D-229ENST00000638939 MIR22HGQ0VDD5 57 aa1.63□□□□□ -2.15
PDE4D-229ENST00000638939 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
PDE4D-229ENST00000638939 UQCR11O14957 56 aa1.61□□□□□ -2.15
PDE4D-229ENST00000638939 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
PDE4D-229ENST00000638939 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
PDE4D-229ENST00000638939 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
PDE4D-229ENST00000638939 CCDC179H3BU77 68 aa1.56□□□□□ -2.16
PDE4D-229ENST00000638939 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
PDE4D-229ENST00000638939 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
PDE4D-229ENST00000638939 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
PDE4D-229ENST00000638939 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
PDE4D-229ENST00000638939 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
PDE4D-229ENST00000638939 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
PDE4D-229ENST00000638939 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
PDE4D-229ENST00000638939 PRM1P04553 51 aa0.71□□□□□ -2.3
PDE4D-229ENST00000638939 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 115.4 ms