RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
CACNA1A-257ENST00000638009 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CACNA1A-257ENST00000638009 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
CACNA1A-257ENST00000638009 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
CACNA1A-257ENST00000638009 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
CACNA1A-257ENST00000638009 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.61
CACNA1A-257ENST00000638009 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
CACNA1A-257ENST00000638009 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
CACNA1A-257ENST00000638009 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
CACNA1A-257ENST00000638009 RYR3Q15413 4870 aa4.92□□□□□ -1.62
CACNA1A-257ENST00000638009 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
CACNA1A-257ENST00000638009 LPAP08519 4548 aa4.85□□□□□ -1.63
CACNA1A-257ENST00000638009 HERC1Q15751 4861 aa4.84□□□□□ -1.63
CACNA1A-257ENST00000638009 LRP2P98164 4655 aa4.79□□□□□ -1.64
CACNA1A-257ENST00000638009 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CACNA1A-257ENST00000638009 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
CACNA1A-257ENST00000638009 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
CACNA1A-257ENST00000638009 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
CACNA1A-257ENST00000638009 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
CACNA1A-257ENST00000638009 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
CACNA1A-257ENST00000638009 RYR2Q92736 4967 aa4.59□□□□□ -1.67
CACNA1A-257ENST00000638009 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
CACNA1A-257ENST00000638009 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
CACNA1A-257ENST00000638009 HERC2O95714 4834 aa4.49□□□□□ -1.69
CACNA1A-257ENST00000638009 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.7
CACNA1A-257ENST00000638009 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
CACNA1A-257ENST00000638009 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
CACNA1A-257ENST00000638009 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
CACNA1A-257ENST00000638009 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
CACNA1A-257ENST00000638009 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
CACNA1A-257ENST00000638009 HYDINQ4G0P3 5121 aa4.25□□□□□ -1.73
CACNA1A-257ENST00000638009 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
CACNA1A-257ENST00000638009 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
CACNA1A-257ENST00000638009 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
CACNA1A-257ENST00000638009 EPPK1P58107 5090 aaKnown RBP4.11□□□□□ -1.75
CACNA1A-257ENST00000638009 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
CACNA1A-257ENST00000638009 MUC2Q02817 5179 aa3.89□□□□□ -1.79
CACNA1A-257ENST00000638009 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
CACNA1A-257ENST00000638009 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
CACNA1A-257ENST00000638009 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
CACNA1A-257ENST00000638009 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
CACNA1A-257ENST00000638009 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
CACNA1A-257ENST00000638009 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
CACNA1A-257ENST00000638009 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
CACNA1A-257ENST00000638009 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
CACNA1A-257ENST00000638009 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
CACNA1A-257ENST00000638009 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
CACNA1A-257ENST00000638009 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
CACNA1A-257ENST00000638009 KMT2DO14686 5537 aa3.5□□□□□ -1.85
CACNA1A-257ENST00000638009 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CACNA1A-257ENST00000638009 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CACNA1A-257ENST00000638009 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
CACNA1A-257ENST00000638009 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
CACNA1A-257ENST00000638009 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
CACNA1A-257ENST00000638009 NEBP20929 6669 aa3.31□□□□□ -1.88
CACNA1A-257ENST00000638009 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
CACNA1A-257ENST00000638009 USH2AO75445 5202 aa3.24□□□□□ -1.89
CACNA1A-257ENST00000638009 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
CACNA1A-257ENST00000638009 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
CACNA1A-257ENST00000638009 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
CACNA1A-257ENST00000638009 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CACNA1A-257ENST00000638009 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
CACNA1A-257ENST00000638009 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
CACNA1A-257ENST00000638009 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
CACNA1A-257ENST00000638009 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CACNA1A-257ENST00000638009 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CACNA1A-257ENST00000638009 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
CACNA1A-257ENST00000638009 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CACNA1A-257ENST00000638009 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
CACNA1A-257ENST00000638009 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
CACNA1A-257ENST00000638009 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
CACNA1A-257ENST00000638009 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
CACNA1A-257ENST00000638009 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CACNA1A-257ENST00000638009 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
CACNA1A-257ENST00000638009 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
CACNA1A-257ENST00000638009 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
CACNA1A-257ENST00000638009 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms