RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 TTTY10Q9BZA0 68 aa-2.77□□□□□ -2.85
SRP54-214ENST00000630962 PLNP26678 52 aa-2.78□□□□□ -2.85
SRP54-214ENST00000630962 CPS1P31327 1500 aa-2.78□□□□□ -2.86
SRP54-214ENST00000630962 AGLP35573 1532 aa-2.78□□□□□ -2.86
SRP54-214ENST00000630962 DNAH14Q0VDD8 3507 aa-2.79□□□□□ -2.86
SRP54-214ENST00000630962 CFAP47Q6ZTR5 3102 aa-2.79□□□□□ -2.86
SRP54-214ENST00000630962 DNAH12Q6ZR08 3092 aa-2.8□□□□□ -2.86
SRP54-214ENST00000630962 SMIM2Q9BVW6 85 aa-2.8□□□□□ -2.86
SRP54-214ENST00000630962 USP34Q70CQ2 3546 aa-2.81□□□□□ -2.86
SRP54-214ENST00000630962 MKI67P46013 3256 aaKnown RBP-2.81□□□□□ -2.86
SRP54-214ENST00000630962 EFCAB5A4FU69 1503 aa-2.84□□□□□ -2.86
SRP54-214ENST00000630962 CLTCL1P53675 1640 aa-2.86□□□□□ -2.87
SRP54-214ENST00000630962 ABCA10Q8WWZ4 1543 aa-2.87□□□□□ -2.87
SRP54-214ENST00000630962 UNC80Q8N2C7 3258 aa-2.88□□□□□ -2.87
SRP54-214ENST00000630962 ABCA5Q8WWZ7 1642 aa-2.89□□□□□ -2.87
SRP54-214ENST00000630962 DDX60Q8IY21 1712 aaKnown RBP-2.89□□□□□ -2.87
SRP54-214ENST00000630962 TRPM2O94759 1503 aa-2.9□□□□□ -2.87
SRP54-214ENST00000630962 XIRP2A4UGR9 3374 aa-2.91□□□□□ -2.87
SRP54-214ENST00000630962 LOC400499M0QZD8 3231 aa-2.93□□□□□ -2.88
SRP54-214ENST00000630962 A0A087WWC5 75 aa-2.94□□□□□ -2.88
SRP54-214ENST00000630962 IQGAP1P46940 1657 aa-2.95□□□□□ -2.88
SRP54-214ENST00000630962 DEFB133Q30KQ1 61 aa-2.95□□□□□ -2.88
SRP54-214ENST00000630962 RHPN1-AS1Q9BWJ2 59 aa-2.96□□□□□ -2.88
SRP54-214ENST00000630962 NFAT5O94916 1531 aa-2.97□□□□□ -2.88
SRP54-214ENST00000630962 TOMM7Q9P0U1 55 aa-2.97□□□□□ -2.88
SRP54-214ENST00000630962 SMIM5Q71RC9 77 aa-3□□□□□ -2.89
SRP54-214ENST00000630962 PRXQ9BXM0 1461 aa-3.02□□□□□ -2.89
SRP54-214ENST00000630962 NDUFA1O15239 70 aa-3.02□□□□□ -2.89
SRP54-214ENST00000630962 HTN1P15515 57 aa-3.03□□□□□ -2.89
SRP54-214ENST00000630962 LINC01590Q5TEZ4 76 aa-3.03□□□□□ -2.89
SRP54-214ENST00000630962 A0A096LNI7 61 aa-3.05□□□□□ -2.9
SRP54-214ENST00000630962 ASPMQ8IZT6 3477 aa-3.07□□□□□ -2.9
SRP54-214ENST00000630962 ABCC8Q09428 1581 aa-3.08□□□□□ -2.9
SRP54-214ENST00000630962 CD52P31358 61 aa-3.08□□□□□ -2.9
SRP54-214ENST00000630962 CMC2Q9NRP2 79 aa-3.09□□□□□ -2.9
SRP54-214ENST00000630962 ADCY10Q96PN6 1610 aa-3.09□□□□□ -2.9
SRP54-214ENST00000630962 FANCD2Q9BXW9 1451 aa-3.11□□□□□ -2.91
SRP54-214ENST00000630962 BRCA2P51587 3418 aa-3.12□□□□□ -2.91
SRP54-214ENST00000630962 KRTAP19-2Q3LHN2 52 aa-3.17□□□□□ -2.92
SRP54-214ENST00000630962 CENPFP49454 3210 aa-3.18□□□□□ -2.92
SRP54-214ENST00000630962 CDH23Q9H251 3354 aa-3.18□□□□□ -2.92
SRP54-214ENST00000630962 VCANP13611 3396 aa-3.23□□□□□ -2.93
SRP54-214ENST00000630962 ERICH3Q5RHP9 1530 aa-3.24□□□□□ -2.93
SRP54-214ENST00000630962 DUOX1Q9NRD9 1551 aa-3.25□□□□□ -2.93
SRP54-214ENST00000630962 DEFB124Q8NES8 71 aa-3.27□□□□□ -2.93
SRP54-214ENST00000630962 VPS13AQ96RL7 3174 aa-3.29□□□□□ -2.94
SRP54-214ENST00000630962 RPL39P62891 51 aaKnown RBP-3.32□□□□□ -2.94
SRP54-214ENST00000630962 SAMD9LQ8IVG5 1584 aa-3.34□□□□□ -2.94
SRP54-214ENST00000630962 TOP2AP11388 1531 aaKnown RBP-3.38□□□□□ -2.95
SRP54-214ENST00000630962 RPL39LQ96EH5 51 aaKnown RBP-3.44□□□□□ -2.96
SRP54-214ENST00000630962 LINC01556Q5JQF7 62 aa-3.47□□□□□ -2.96
SRP54-214ENST00000630962 DEFB104AQ8WTQ1 72 aa-3.48□□□□□ -2.97
SRP54-214ENST00000630962 ATP7AQ04656 1500 aa-3.49□□□□□ -2.97
SRP54-214ENST00000630962 SMIM31A0A1B0GVY4 71 aa-3.5□□□□□ -2.97
SRP54-214ENST00000630962 MROH2BQ7Z745 1585 aa-3.53□□□□□ -2.97
SRP54-214ENST00000630962 SNRPGP15A8MWD9 76 aa-3.59□□□□□ -2.98
SRP54-214ENST00000630962 H3BUX3 64 aa-3.6□□□□□ -2.99
SRP54-214ENST00000630962 UTRNP46939 3433 aa-3.66□□□□□ -3
SRP54-214ENST00000630962 IQGAP2Q13576 1575 aa-3.68□□□□□ -3
SRP54-214ENST00000630962 TOMM5Q8N4H5 51 aa-3.75□□□□□ -3.01
SRP54-214ENST00000630962 APELAP0DMC3 54 aa-3.81□□□□□ -3.02
SRP54-214ENST00000630962 A0A096LPF7 62 aa-3.85□□□□□ -3.03
SRP54-214ENST00000630962 K7EIM0 57 aa-3.86□□□□□ -3.03
SRP54-214ENST00000630962 ARHGAP5-AS1Q96IT6 56 aa-3.95□□□□□ -3.04
SRP54-214ENST00000630962 PRCDQ00LT1 54 aa-3.98□□□□□ -3.05
SRP54-214ENST00000630962 TMEM167AQ8TBQ9 72 aa-4.04□□□□□ -3.06
SRP54-214ENST00000630962 HTN3P15516 51 aa-4.05□□□□□ -3.06
SRP54-214ENST00000630962 GOLGB1Q14789 3259 aaKnown RBP-4.11□□□□□ -3.07
SRP54-214ENST00000630962 GCC2Q8IWJ2 1684 aa-4.25□□□□□ -3.09
SRP54-214ENST00000630962 SNRPGP62308 76 aaKnown RBP-4.29□□□□□ -3.1
SRP54-214ENST00000630962 Q9Y3F1 56 aa-4.34□□□□□ -3.1
SRP54-214ENST00000630962 RPL39P5Q59GN2 51 aa-4.35□□□□□ -3.11
SRP54-214ENST00000630962 DEFB108AA8MXU0 73 aa-4.41□□□□□ -3.12
SRP54-214ENST00000630962 H3BSH0 61 aa-4.44□□□□□ -3.12
SRP54-214ENST00000630962 COX14Q96I36 57 aa-4.61□□□□□ -3.15
SRP54-214ENST00000630962 DEFB108BQ8NET1 73 aa-4.76□□□□□ -3.17
SRP54-214ENST00000630962 STATHP02808 62 aa-5.31□□□□□ -3.26
Retrieved 77 of 20,778 RNA–protein pairs in 151.6 ms