RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 A0A1B0GU33 70 aa4.36□□□□□ -1.71
CHD2-218ENST00000629346 PCP4P48539 62 aa4.36□□□□□ -1.71
CHD2-218ENST00000629346 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
CHD2-218ENST00000629346 MT1GP13640 62 aa4.35□□□□□ -1.71
CHD2-218ENST00000629346 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
CHD2-218ENST00000629346 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
CHD2-218ENST00000629346 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
CHD2-218ENST00000629346 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
CHD2-218ENST00000629346 A0A1B0GU69 56 aa4.28□□□□□ -1.72
CHD2-218ENST00000629346 MT1MQ8N339 61 aa4.28□□□□□ -1.72
CHD2-218ENST00000629346 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
CHD2-218ENST00000629346 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
CHD2-218ENST00000629346 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
CHD2-218ENST00000629346 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
CHD2-218ENST00000629346 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
CHD2-218ENST00000629346 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
CHD2-218ENST00000629346 A8MU10 97 aa4.19□□□□□ -1.74
CHD2-218ENST00000629346 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
CHD2-218ENST00000629346 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
CHD2-218ENST00000629346 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
CHD2-218ENST00000629346 MT1LQ93083 61 aa4.14□□□□□ -1.75
CHD2-218ENST00000629346 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
CHD2-218ENST00000629346 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
CHD2-218ENST00000629346 TNP1P09430 55 aa4.09□□□□□ -1.75
CHD2-218ENST00000629346 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CHD2-218ENST00000629346 TMEM258P61165 79 aa4.07□□□□□ -1.76
CHD2-218ENST00000629346 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
CHD2-218ENST00000629346 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
CHD2-218ENST00000629346 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
CHD2-218ENST00000629346 UQCR11O14957 56 aa4.02□□□□□ -1.77
CHD2-218ENST00000629346 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
CHD2-218ENST00000629346 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
CHD2-218ENST00000629346 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CHD2-218ENST00000629346 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CHD2-218ENST00000629346 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
CHD2-218ENST00000629346 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
CHD2-218ENST00000629346 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
CHD2-218ENST00000629346 K7ERS5 55 aa3.86□□□□□ -1.79
CHD2-218ENST00000629346 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
CHD2-218ENST00000629346 V9GYY9 64 aa3.86□□□□□ -1.79
CHD2-218ENST00000629346 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CHD2-218ENST00000629346 PSPHP1O15172 72 aa3.84□□□□□ -1.79
CHD2-218ENST00000629346 Q1T7F1 81 aa3.83□□□□□ -1.8
CHD2-218ENST00000629346 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CHD2-218ENST00000629346 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
CHD2-218ENST00000629346 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
CHD2-218ENST00000629346 A6NED7 52 aa3.72□□□□□ -1.81
CHD2-218ENST00000629346 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
CHD2-218ENST00000629346 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
CHD2-218ENST00000629346 ROMO1P60602 79 aa3.59□□□□□ -1.83
CHD2-218ENST00000629346 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CHD2-218ENST00000629346 MT3P25713 68 aa3.55□□□□□ -1.84
CHD2-218ENST00000629346 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
CHD2-218ENST00000629346 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
CHD2-218ENST00000629346 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CHD2-218ENST00000629346 MT1AP04731 61 aa3.5□□□□□ -1.85
CHD2-218ENST00000629346 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
CHD2-218ENST00000629346 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CHD2-218ENST00000629346 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CHD2-218ENST00000629346 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CHD2-218ENST00000629346 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
CHD2-218ENST00000629346 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
CHD2-218ENST00000629346 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
CHD2-218ENST00000629346 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CHD2-218ENST00000629346 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
CHD2-218ENST00000629346 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CHD2-218ENST00000629346 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CHD2-218ENST00000629346 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
CHD2-218ENST00000629346 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CHD2-218ENST00000629346 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
CHD2-218ENST00000629346 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
CHD2-218ENST00000629346 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CHD2-218ENST00000629346 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CHD2-218ENST00000629346 INE1O15225 51 aa2.16□□□□□ -2.06
CHD2-218ENST00000629346 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
CHD2-218ENST00000629346 PRM1P04553 51 aa1.83□□□□□ -2.12
CHD2-218ENST00000629346 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms