RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
UBE3A-217ENST00000628890 MGAM2Q2M2H8 2515 aa0.57□□□□□ -2.32
UBE3A-217ENST00000628890 VPS13CQ709C8 3753 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 MDN1Q9NU22 5596 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 FAT1Q14517 4588 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 MT1AP04731 61 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 SPRR2BP35325 72 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 HRNRQ86YZ3 2850 aaPredicted RBP0.56□□□□□ -2.32
UBE3A-217ENST00000628890 RYR2Q92736 4967 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 RYR1P21817 5038 aa0.56□□□□□ -2.32
UBE3A-217ENST00000628890 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
UBE3A-217ENST00000628890 NIPBLQ6KC79 2804 aaeCLIP0.55□□□□□ -2.328e-8■■■■■ 41.9
UBE3A-217ENST00000628890 HYDINQ4G0P3 5121 aa0.55□□□□□ -2.32
UBE3A-217ENST00000628890 DNAH5Q8TE73 4624 aa0.55□□□□□ -2.32
UBE3A-217ENST00000628890 LAMA1P25391 3075 aa0.55□□□□□ -2.32
UBE3A-217ENST00000628890 PCLOQ9Y6V0 5065 aa0.54□□□□□ -2.32
UBE3A-217ENST00000628890 SVEP1Q4LDE5 3571 aa0.54□□□□□ -2.32
UBE3A-217ENST00000628890 MAP1AP78559 2803 aaPredicted RBP0.54□□□□□ -2.32
UBE3A-217ENST00000628890 DNAH17Q9UFH2 4485 aa0.54□□□□□ -2.32
UBE3A-217ENST00000628890 LRP1BQ9NZR2 4599 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 SPRR2AP35326 72 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 KRTAP19-5Q3LI72 72 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 LPAP08519 4548 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 CMYA5Q8N3K9 4069 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 HERC2O95714 4834 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
UBE3A-217ENST00000628890 KIAA1109Q2LD37 5005 aa0.53□□□□□ -2.33
UBE3A-217ENST00000628890 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
UBE3A-217ENST00000628890 PKHD1P08F94 4074 aa0.51□□□□□ -2.33
UBE3A-217ENST00000628890 DYNC1H1Q14204 4646 aaKnown RBP0.51□□□□□ -2.33
UBE3A-217ENST00000628890 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
UBE3A-217ENST00000628890 DEFB4AO15263 64 aa0.5□□□□□ -2.33
UBE3A-217ENST00000628890 HERC1Q15751 4861 aa0.5□□□□□ -2.33
UBE3A-217ENST00000628890 TRRAPQ9Y4A5 3859 aa0.49□□□□□ -2.33
UBE3A-217ENST00000628890 ABCA13Q86UQ4 5058 aa0.49□□□□□ -2.33
UBE3A-217ENST00000628890 STAB2Q8WWQ8 2551 aa0.48□□□□□ -2.33
UBE3A-217ENST00000628890 SPRR2EP22531 72 aa0.48□□□□□ -2.33
UBE3A-217ENST00000628890 SPRR2FQ96RM1 72 aa0.48□□□□□ -2.33
UBE3A-217ENST00000628890 MUC2Q02817 5179 aa0.47□□□□□ -2.33
UBE3A-217ENST00000628890 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
UBE3A-217ENST00000628890 MUC17Q685J3 4493 aa0.46□□□□□ -2.34
UBE3A-217ENST00000628890 MT1EP04732 61 aa0.44□□□□□ -2.34
UBE3A-217ENST00000628890 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
UBE3A-217ENST00000628890 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
UBE3A-217ENST00000628890 STARD9Q9P2P6 4700 aa0.43□□□□□ -2.34
UBE3A-217ENST00000628890 MT1HP80294 61 aa0.42□□□□□ -2.34
UBE3A-217ENST00000628890 MT1LQ93083 61 aa0.42□□□□□ -2.34
UBE3A-217ENST00000628890 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
UBE3A-217ENST00000628890 LRP2P98164 4655 aa0.42□□□□□ -2.34
UBE3A-217ENST00000628890 HMCN2Q8NDA2 5059 aa0.42□□□□□ -2.34
UBE3A-217ENST00000628890 KRTAP20-1Q3LI63 56 aa0.41□□□□□ -2.34
UBE3A-217ENST00000628890 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
UBE3A-217ENST00000628890 GPR98Q8WXG9 6306 aa0.38□□□□□ -2.35
UBE3A-217ENST00000628890 SPRR2GQ9BYE4 73 aa0.38□□□□□ -2.35
UBE3A-217ENST00000628890 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
UBE3A-217ENST00000628890 NEBP20929 6669 aa0.37□□□□□ -2.35
UBE3A-217ENST00000628890 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
UBE3A-217ENST00000628890 SSPOA2VEC9 5147 aa0.36□□□□□ -2.35
UBE3A-217ENST00000628890 KMT2DO14686 5537 aa0.35□□□□□ -2.35
UBE3A-217ENST00000628890 MT1XP80297 61 aa0.34□□□□□ -2.36
UBE3A-217ENST00000628890 USH2AO75445 5202 aa0.34□□□□□ -2.36
UBE3A-217ENST00000628890 MUC12Q9UKN1 5478 aa0.33□□□□□ -2.36
UBE3A-217ENST00000628890 MT1HL1P0DM35 61 aa0.31□□□□□ -2.36
UBE3A-217ENST00000628890 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
UBE3A-217ENST00000628890 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
UBE3A-217ENST00000628890 KRTAP19-8Q3LI54 63 aa0.3□□□□□ -2.36
UBE3A-217ENST00000628890 MT1GP13640 62 aa0.29□□□□□ -2.36
UBE3A-217ENST00000628890 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
UBE3A-217ENST00000628890 MT4P47944 62 aa0.27□□□□□ -2.37
UBE3A-217ENST00000628890 MT2AP02795 61 aa0.26□□□□□ -2.37
UBE3A-217ENST00000628890 KRTAP19-2Q3LHN2 52 aa0.26□□□□□ -2.37
UBE3A-217ENST00000628890 KRTAP19-7Q3SYF9 63 aa0.26□□□□□ -2.37
UBE3A-217ENST00000628890 MT1FP04733 61 aa0.24□□□□□ -2.37
UBE3A-217ENST00000628890 KRTAP6-1Q3LI64 71 aa0.24□□□□□ -2.37
UBE3A-217ENST00000628890 MT1MQ8N339 61 aa0.24□□□□□ -2.37
UBE3A-217ENST00000628890 DSTQ03001 7570 aaKnown RBP0.22□□□□□ -2.37
UBE3A-217ENST00000628890 MT1BP07438 61 aa0.21□□□□□ -2.38
UBE3A-217ENST00000628890 KRTAP20-2Q3LI61 65 aa0.19□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 94.6 ms