RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 IGIPA6NJ69 53 aa-1.91□□□□□ -2.72
CDR1-202ENST00000625883 SMCO4Q9NRQ5 59 aa-1.91□□□□□ -2.72
CDR1-202ENST00000625883 LMO7Q8WWI1 1683 aa-1.92□□□□□ -2.72
CDR1-202ENST00000625883 CCDC180Q9P1Z9 1646 aa-1.94□□□□□ -2.72
CDR1-202ENST00000625883 SYCP2Q9BX26 1530 aa-1.94□□□□□ -2.72
CDR1-202ENST00000625883 PDCD5O14737 125 aa-1.94□□□□□ -2.72
CDR1-202ENST00000625883 CD52P31358 61 aa-1.94□□□□□ -2.72
CDR1-202ENST00000625883 DEFB131AP59861 70 aa-1.94□□□□□ -2.72
CDR1-202ENST00000625883 MROH2AA6NES4 1674 aa-1.95□□□□□ -2.72
CDR1-202ENST00000625883 XIRP2A4UGR9 3374 aa-1.95□□□□□ -2.72
CDR1-202ENST00000625883 DEFB133Q30KQ1 61 aa-1.96□□□□□ -2.72
CDR1-202ENST00000625883 DEFB104AQ8WTQ1 72 aa-1.97□□□□□ -2.72
CDR1-202ENST00000625883 UTRNP46939 3433 aa-1.98□□□□□ -2.73
CDR1-202ENST00000625883 NMES1Q9C002 83 aa-1.98□□□□□ -2.73
CDR1-202ENST00000625883 SCRIBQ14160 1630 aa-2.01□□□□□ -2.73
CDR1-202ENST00000625883 SERF2P84101 59 aa-2.01□□□□□ -2.73
CDR1-202ENST00000625883 TFF3Q07654 80 aa-2.01□□□□□ -2.73
CDR1-202ENST00000625883 EFCAB5A4FU69 1503 aa-2.03□□□□□ -2.73
CDR1-202ENST00000625883 UGGT1Q9NYU2 1555 aa-2.04□□□□□ -2.74
CDR1-202ENST00000625883 AGLP35573 1532 aa-2.05□□□□□ -2.74
CDR1-202ENST00000625883 H0YGX0 51 aa-2.05□□□□□ -2.74
CDR1-202ENST00000625883 HTN1P15515 57 aa-2.06□□□□□ -2.74
CDR1-202ENST00000625883 RHPN1-AS1Q9BWJ2 59 aa-2.07□□□□□ -2.74
CDR1-202ENST00000625883 IQGAP1P46940 1657 aa-2.09□□□□□ -2.74
CDR1-202ENST00000625883 ABCA5Q8WWZ7 1642 aa-2.1□□□□□ -2.74
CDR1-202ENST00000625883 NFAT5O94916 1531 aa-2.1□□□□□ -2.74
CDR1-202ENST00000625883 GOLGB1Q14789 3259 aaKnown RBP-2.1□□□□□ -2.75
CDR1-202ENST00000625883 S100ZQ8WXG8 99 aa-2.1□□□□□ -2.75
CDR1-202ENST00000625883 CPS1P31327 1500 aa-2.11□□□□□ -2.75
CDR1-202ENST00000625883 CLTCL1P53675 1640 aa-2.12□□□□□ -2.75
CDR1-202ENST00000625883 ABCA10Q8WWZ4 1543 aa-2.12□□□□□ -2.75
CDR1-202ENST00000625883 SMIM2Q9BVW6 85 aa-2.13□□□□□ -2.75
CDR1-202ENST00000625883 TRPM2O94759 1503 aa-2.13□□□□□ -2.75
CDR1-202ENST00000625883 DDX60Q8IY21 1712 aaKnown RBP-2.13□□□□□ -2.75
CDR1-202ENST00000625883 A0A096LNI7 61 aa-2.15□□□□□ -2.75
CDR1-202ENST00000625883 PLNP26678 52 aa-2.15□□□□□ -2.75
CDR1-202ENST00000625883 PRXQ9BXM0 1461 aa-2.17□□□□□ -2.76
CDR1-202ENST00000625883 A0A087WWC5 75 aa-2.18□□□□□ -2.76
CDR1-202ENST00000625883 DEFB124Q8NES8 71 aa-2.18□□□□□ -2.76
CDR1-202ENST00000625883 LINC01556Q5JQF7 62 aa-2.19□□□□□ -2.76
CDR1-202ENST00000625883 LINC01590Q5TEZ4 76 aa-2.2□□□□□ -2.76
CDR1-202ENST00000625883 ADCY10Q96PN6 1610 aa-2.22□□□□□ -2.76
CDR1-202ENST00000625883 NDUFA1O15239 70 aa-2.25□□□□□ -2.77
CDR1-202ENST00000625883 FANCD2Q9BXW9 1451 aa-2.25□□□□□ -2.77
CDR1-202ENST00000625883 ABCC8Q09428 1581 aa-2.25□□□□□ -2.77
CDR1-202ENST00000625883 TOMM7Q9P0U1 55 aa-2.26□□□□□ -2.77
CDR1-202ENST00000625883 DUOX1Q9NRD9 1551 aa-2.32□□□□□ -2.78
CDR1-202ENST00000625883 CMC2Q9NRP2 79 aa-2.33□□□□□ -2.78
CDR1-202ENST00000625883 SMIM5Q71RC9 77 aa-2.34□□□□□ -2.78
CDR1-202ENST00000625883 ERICH3Q5RHP9 1530 aa-2.37□□□□□ -2.79
CDR1-202ENST00000625883 SAMD9LQ8IVG5 1584 aa-2.41□□□□□ -2.8
CDR1-202ENST00000625883 H3BUX3 64 aa-2.42□□□□□ -2.8
CDR1-202ENST00000625883 TOP2AP11388 1531 aaKnown RBP-2.43□□□□□ -2.8
CDR1-202ENST00000625883 APELAP0DMC3 54 aa-2.43□□□□□ -2.8
CDR1-202ENST00000625883 RPL39P62891 51 aaKnown RBP-2.43□□□□□ -2.8
CDR1-202ENST00000625883 HTN3P15516 51 aa-2.46□□□□□ -2.8
CDR1-202ENST00000625883 A0A096LPF7 62 aa-2.47□□□□□ -2.81
CDR1-202ENST00000625883 ATP7AQ04656 1500 aa-2.48□□□□□ -2.81
CDR1-202ENST00000625883 RPL39LQ96EH5 51 aaKnown RBP-2.51□□□□□ -2.81
CDR1-202ENST00000625883 MROH2BQ7Z745 1585 aa-2.54□□□□□ -2.82
CDR1-202ENST00000625883 H3BSH0 61 aa-2.58□□□□□ -2.82
CDR1-202ENST00000625883 SMIM31A0A1B0GVY4 71 aa-2.6□□□□□ -2.83
CDR1-202ENST00000625883 Q9Y3F1 56 aa-2.64□□□□□ -2.83
CDR1-202ENST00000625883 PRCDQ00LT1 54 aa-2.65□□□□□ -2.83
CDR1-202ENST00000625883 SNRPGP15A8MWD9 76 aa-2.66□□□□□ -2.84
CDR1-202ENST00000625883 IQGAP2Q13576 1575 aa-2.67□□□□□ -2.84
CDR1-202ENST00000625883 TMEM167AQ8TBQ9 72 aa-2.67□□□□□ -2.84
CDR1-202ENST00000625883 K7EIM0 57 aa-2.71□□□□□ -2.84
CDR1-202ENST00000625883 COX14Q96I36 57 aa-2.72□□□□□ -2.85
CDR1-202ENST00000625883 ARHGAP5-AS1Q96IT6 56 aa-2.77□□□□□ -2.85
CDR1-202ENST00000625883 TOMM5Q8N4H5 51 aa-2.81□□□□□ -2.86
CDR1-202ENST00000625883 DEFB108BQ8NET1 73 aa-2.84□□□□□ -2.86
CDR1-202ENST00000625883 STATHP02808 62 aa-2.85□□□□□ -2.87
CDR1-202ENST00000625883 DEFB108AA8MXU0 73 aa-2.96□□□□□ -2.88
CDR1-202ENST00000625883 RPL39P5Q59GN2 51 aa-2.96□□□□□ -2.88
CDR1-202ENST00000625883 SNRPGP62308 76 aaKnown RBP-2.99□□□□□ -2.89
CDR1-202ENST00000625883 GCC2Q8IWJ2 1684 aa-3.02□□□□□ -2.89
Retrieved 77 of 20,778 RNA–protein pairs in 99.4 ms