RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
SNX12-206ENST00000622259 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SNX12-206ENST00000622259 A8MU10 97 aa5.71□□□□□ -1.5
SNX12-206ENST00000622259 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
SNX12-206ENST00000622259 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
SNX12-206ENST00000622259 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
SNX12-206ENST00000622259 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.5
SNX12-206ENST00000622259 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
SNX12-206ENST00000622259 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
SNX12-206ENST00000622259 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
SNX12-206ENST00000622259 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
SNX12-206ENST00000622259 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
SNX12-206ENST00000622259 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
SNX12-206ENST00000622259 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
SNX12-206ENST00000622259 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
SNX12-206ENST00000622259 MT1EP04732 61 aa5.45□□□□□ -1.54
SNX12-206ENST00000622259 ROMO1P60602 79 aa5.41□□□□□ -1.54
SNX12-206ENST00000622259 H3BS24 57 aa5.38□□□□□ -1.55
SNX12-206ENST00000622259 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
SNX12-206ENST00000622259 AHNAKQ09666 5890 aaKnown RBP5.28□□□□□ -1.56
SNX12-206ENST00000622259 MT1GP13640 62 aa5.28□□□□□ -1.56
SNX12-206ENST00000622259 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
SNX12-206ENST00000622259 TNP1P09430 55 aa5.27□□□□□ -1.57
SNX12-206ENST00000622259 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
SNX12-206ENST00000622259 MT1MQ8N339 61 aa5.24□□□□□ -1.57
SNX12-206ENST00000622259 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
SNX12-206ENST00000622259 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
SNX12-206ENST00000622259 PP632Q6XCG6 107 aa5.19□□□□□ -1.58
SNX12-206ENST00000622259 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
SNX12-206ENST00000622259 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
SNX12-206ENST00000622259 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
SNX12-206ENST00000622259 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
SNX12-206ENST00000622259 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
SNX12-206ENST00000622259 MT1LQ93083 61 aa5.07□□□□□ -1.6
SNX12-206ENST00000622259 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
SNX12-206ENST00000622259 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SNX12-206ENST00000622259 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
SNX12-206ENST00000622259 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
SNX12-206ENST00000622259 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
SNX12-206ENST00000622259 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
SNX12-206ENST00000622259 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
SNX12-206ENST00000622259 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
SNX12-206ENST00000622259 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
SNX12-206ENST00000622259 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
SNX12-206ENST00000622259 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
SNX12-206ENST00000622259 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
SNX12-206ENST00000622259 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
SNX12-206ENST00000622259 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
SNX12-206ENST00000622259 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
SNX12-206ENST00000622259 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SNX12-206ENST00000622259 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
SNX12-206ENST00000622259 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
SNX12-206ENST00000622259 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
SNX12-206ENST00000622259 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
SNX12-206ENST00000622259 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
SNX12-206ENST00000622259 MT1AP04731 61 aa4.27□□□□□ -1.73
SNX12-206ENST00000622259 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
SNX12-206ENST00000622259 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
SNX12-206ENST00000622259 MT3P25713 68 aa3.92□□□□□ -1.78
SNX12-206ENST00000622259 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SNX12-206ENST00000622259 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
SNX12-206ENST00000622259 INE1O15225 51 aa3.7□□□□□ -1.82
SNX12-206ENST00000622259 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
SNX12-206ENST00000622259 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
SNX12-206ENST00000622259 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
SNX12-206ENST00000622259 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
SNX12-206ENST00000622259 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
SNX12-206ENST00000622259 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
SNX12-206ENST00000622259 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
SNX12-206ENST00000622259 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
SNX12-206ENST00000622259 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SNX12-206ENST00000622259 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SNX12-206ENST00000622259 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SNX12-206ENST00000622259 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
SNX12-206ENST00000622259 PRM1P04553 51 aa2.77□□□□□ -1.97
SNX12-206ENST00000622259 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
SNX12-206ENST00000622259 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 97.5 ms