RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SNX12-206ENST00000622259 ABCC9O60706 1549 aa35.45■■■■□ 3.27
SNX12-206ENST00000622259 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
SNX12-206ENST00000622259 DNAJC5BQ9UF47 199 aa34.23■■■■□ 3.07
SNX12-206ENST00000622259 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
SNX12-206ENST00000622259 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.86
SNX12-206ENST00000622259 NACADO15069 1562 aa32.74■■■□□ 2.83
SNX12-206ENST00000622259 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
SNX12-206ENST00000622259 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
SNX12-206ENST00000622259 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
SNX12-206ENST00000622259 DNAJC5Q9H3Z4 198 aa32.03■■■□□ 2.72
SNX12-206ENST00000622259 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
SNX12-206ENST00000622259 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
SNX12-206ENST00000622259 CC2D2AQ9P2K1 1620 aa31.94■■■□□ 2.7
SNX12-206ENST00000622259 SHROOM4Q9ULL8 1493 aa31.68■■■□□ 2.66
SNX12-206ENST00000622259 EIF4G1Q04637 1599 aaKnown RBP31.63■■■□□ 2.65
SNX12-206ENST00000622259 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
SNX12-206ENST00000622259 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
SNX12-206ENST00000622259 DCAF1Q9Y4B6 1507 aa31.2■■■□□ 2.59
SNX12-206ENST00000622259 CUX2O14529 1486 aa30.87■■■□□ 2.53
SNX12-206ENST00000622259 ERCC6Q03468 1493 aa30.6■■■□□ 2.49
SNX12-206ENST00000622259 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
SNX12-206ENST00000622259 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
SNX12-206ENST00000622259 NESP48681 1621 aa30.22■■■□□ 2.43
SNX12-206ENST00000622259 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
SNX12-206ENST00000622259 THOC2Q8NI27 1593 aaKnown RBP30.05■■■□□ 2.4
SNX12-206ENST00000622259 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
SNX12-206ENST00000622259 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
SNX12-206ENST00000622259 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
SNX12-206ENST00000622259 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
SNX12-206ENST00000622259 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
SNX12-206ENST00000622259 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
SNX12-206ENST00000622259 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
SNX12-206ENST00000622259 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
SNX12-206ENST00000622259 BAZ1AQ9NRL2 1556 aaPredicted RBP29.45■■■□□ 2.31
SNX12-206ENST00000622259 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
SNX12-206ENST00000622259 WDR62O43379 1518 aa29.39■■■□□ 2.3
SNX12-206ENST00000622259 CADPSQ9ULU8 1353 aa29.32■■■□□ 2.28
SNX12-206ENST00000622259 OSCARQ8IYS5 282 aa29.31■■■□□ 2.28
SNX12-206ENST00000622259 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
SNX12-206ENST00000622259 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
SNX12-206ENST00000622259 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
SNX12-206ENST00000622259 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
SNX12-206ENST00000622259 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
SNX12-206ENST00000622259 FANCD2Q9BXW9 1451 aa29■■■□□ 2.23
SNX12-206ENST00000622259 ARHGEF11O15085 1522 aa28.89■■■□□ 2.21
SNX12-206ENST00000622259 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
SNX12-206ENST00000622259 WIZO95785 1651 aa28.86■■■□□ 2.21
SNX12-206ENST00000622259 CFTRP13569 1480 aa28.79■■■□□ 2.2
SNX12-206ENST00000622259 CYB5RLQ6IPT4 315 aa28.75■■■□□ 2.19
SNX12-206ENST00000622259 TRHP20396 242 aaPredicted RBP28.7■■■□□ 2.18
SNX12-206ENST00000622259 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
SNX12-206ENST00000622259 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
SNX12-206ENST00000622259 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
SNX12-206ENST00000622259 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
SNX12-206ENST00000622259 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
SNX12-206ENST00000622259 CHD1O14646 1710 aa28.4■■■□□ 2.14
SNX12-206ENST00000622259 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
SNX12-206ENST00000622259 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
SNX12-206ENST00000622259 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
SNX12-206ENST00000622259 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
SNX12-206ENST00000622259 AQRO60306 1485 aaKnown RBP eCLIP28.29■■■□□ 2.12
SNX12-206ENST00000622259 FBLN2P98095 1184 aa28.26■■■□□ 2.11
SNX12-206ENST00000622259 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
SNX12-206ENST00000622259 DNMBPQ6XZF7 1577 aa28.12■■■□□ 2.09
SNX12-206ENST00000622259 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
SNX12-206ENST00000622259 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
SNX12-206ENST00000622259 CLASP1Q7Z460 1538 aa28.06■■■□□ 2.08
SNX12-206ENST00000622259 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
SNX12-206ENST00000622259 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
SNX12-206ENST00000622259 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
SNX12-206ENST00000622259 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
SNX12-206ENST00000622259 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
SNX12-206ENST00000622259 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
SNX12-206ENST00000622259 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SNX12-206ENST00000622259 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
SNX12-206ENST00000622259 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
SNX12-206ENST00000622259 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
SNX12-206ENST00000622259 WDR97A6NE52 1622 aa27.7■■■□□ 2.03
SNX12-206ENST00000622259 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
SNX12-206ENST00000622259 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
SNX12-206ENST00000622259 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.01
SNX12-206ENST00000622259 CUX1P39880 1505 aa27.54■■■□□ 2
SNX12-206ENST00000622259 ILDR1Q86SU0 546 aaPredicted RBP27.54■■■□□ 2
SNX12-206ENST00000622259 PBRM1Q86U86 1689 aa27.52■■■□□ 2
SNX12-206ENST00000622259 KIF13AQ9H1H9 1805 aa27.5■■□□□ 1.99
SNX12-206ENST00000622259 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
SNX12-206ENST00000622259 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
SNX12-206ENST00000622259 ABCA5Q8WWZ7 1642 aa27.35■■□□□ 1.97
SNX12-206ENST00000622259 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
SNX12-206ENST00000622259 NUP160Q12769 1436 aa27.32■■□□□ 1.96
SNX12-206ENST00000622259 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
SNX12-206ENST00000622259 SHROOM2Q13796 1616 aa27.28■■□□□ 1.96
SNX12-206ENST00000622259 FAM69CQ0P6D2 419 aa27.24■■□□□ 1.95
SNX12-206ENST00000622259 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
SNX12-206ENST00000622259 ABCC10Q5T3U5 1492 aa27.2■■□□□ 1.95
SNX12-206ENST00000622259 PRG4Q92954 1404 aaPredicted RBP27.13■■□□□ 1.93
SNX12-206ENST00000622259 DIP2BQ9P265 1576 aa27.11■■□□□ 1.93
SNX12-206ENST00000622259 KDM6BO15054 1643 aa27.1■■□□□ 1.93
SNX12-206ENST00000622259 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms