RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SEC61GP60059 68 aa7.97□□□□□ -1.13
MMP28-203ENST00000612672 KRTAP20-2Q3LI61 65 aa7.97□□□□□ -1.13
MMP28-203ENST00000612672 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
MMP28-203ENST00000612672 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
MMP28-203ENST00000612672 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
MMP28-203ENST00000612672 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
MMP28-203ENST00000612672 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
MMP28-203ENST00000612672 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.14
MMP28-203ENST00000612672 A0A1B0GU33 70 aa7.89□□□□□ -1.15
MMP28-203ENST00000612672 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
MMP28-203ENST00000612672 KRTAP4-2Q9BYR5 136 aa7.82□□□□□ -1.16
MMP28-203ENST00000612672 KRTAP5-5Q701N2 237 aaPredicted RBP7.81□□□□□ -1.16
MMP28-203ENST00000612672 A0A1B0GU69 56 aa7.8□□□□□ -1.16
MMP28-203ENST00000612672 TMEM258P61165 79 aa7.8□□□□□ -1.16
MMP28-203ENST00000612672 SYNE1Q8NF91 8797 aaKnown RBP7.73□□□□□ -1.17
MMP28-203ENST00000612672 A8MU10 97 aa7.69□□□□□ -1.18
MMP28-203ENST00000612672 KRTAP4-11Q9BYQ6 195 aa7.67□□□□□ -1.18
MMP28-203ENST00000612672 PCP4P48539 62 aa7.64□□□□□ -1.19
MMP28-203ENST00000612672 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
MMP28-203ENST00000612672 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
MMP28-203ENST00000612672 KRTAP12-4P60329 112 aa7.6□□□□□ -1.19
MMP28-203ENST00000612672 TNP1P09430 55 aa7.59□□□□□ -1.19
MMP28-203ENST00000612672 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
MMP28-203ENST00000612672 KRTAP12-3P60328 96 aa7.55□□□□□ -1.2
MMP28-203ENST00000612672 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
MMP28-203ENST00000612672 V9GYY9 64 aa7.38□□□□□ -1.23
MMP28-203ENST00000612672 AHNAKQ09666 5890 aaKnown RBP7.35□□□□□ -1.23
MMP28-203ENST00000612672 UQCR11O14957 56 aa7.34□□□□□ -1.23
MMP28-203ENST00000612672 MUC5BQ9HC84 5762 aaPredicted RBP7.33□□□□□ -1.24
MMP28-203ENST00000612672 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
MMP28-203ENST00000612672 MUC5ACP98088 5654 aa7.32□□□□□ -1.24
MMP28-203ENST00000612672 H3BS24 57 aa7.28□□□□□ -1.24
MMP28-203ENST00000612672 KRTAP5-2Q701N4 177 aa7.27□□□□□ -1.25
MMP28-203ENST00000612672 KRTAP5-8O75690 187 aa7.22□□□□□ -1.25
MMP28-203ENST00000612672 Q1T7F1 81 aa7.22□□□□□ -1.25
MMP28-203ENST00000612672 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
MMP28-203ENST00000612672 PSPHP1O15172 72 aa7.19□□□□□ -1.26
MMP28-203ENST00000612672 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
MMP28-203ENST00000612672 MT1AP04731 61 aa7.01□□□□□ -1.29
MMP28-203ENST00000612672 OBSCNQ5VST9 7968 aa7.01□□□□□ -1.29
MMP28-203ENST00000612672 K7ERS5 55 aa6.95□□□□□ -1.3
MMP28-203ENST00000612672 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
MMP28-203ENST00000612672 A6NED7 52 aa6.92□□□□□ -1.3
MMP28-203ENST00000612672 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
MMP28-203ENST00000612672 KRTAP6-2Q3LI66 62 aa6.86□□□□□ -1.31
MMP28-203ENST00000612672 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
MMP28-203ENST00000612672 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
MMP28-203ENST00000612672 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
MMP28-203ENST00000612672 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
MMP28-203ENST00000612672 KRTAP5-1Q6L8H4 278 aa6.64□□□□□ -1.35
MMP28-203ENST00000612672 ROMO1P60602 79 aa6.58□□□□□ -1.36
MMP28-203ENST00000612672 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
MMP28-203ENST00000612672 MT3P25713 68 aa6.38□□□□□ -1.39
MMP28-203ENST00000612672 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
MMP28-203ENST00000612672 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
MMP28-203ENST00000612672 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
MMP28-203ENST00000612672 LCE1BQ5T7P3 118 aa5.77□□□□□ -1.49
MMP28-203ENST00000612672 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
MMP28-203ENST00000612672 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
MMP28-203ENST00000612672 LCE1CQ5T751 118 aa5.61□□□□□ -1.51
MMP28-203ENST00000612672 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
MMP28-203ENST00000612672 KRTAP5-11Q6L8G4 156 aa5.25□□□□□ -1.57
MMP28-203ENST00000612672 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
MMP28-203ENST00000612672 LCE1FQ5T754 118 aa5.09□□□□□ -1.59
MMP28-203ENST00000612672 PHGR1C9JFL3 82 aa4.99□□□□□ -1.61
MMP28-203ENST00000612672 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
MMP28-203ENST00000612672 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
MMP28-203ENST00000612672 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
MMP28-203ENST00000612672 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
MMP28-203ENST00000612672 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
MMP28-203ENST00000612672 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
MMP28-203ENST00000612672 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
MMP28-203ENST00000612672 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
MMP28-203ENST00000612672 KRTAP21-1Q3LI58 79 aa3.74□□□□□ -1.81
MMP28-203ENST00000612672 INE1O15225 51 aa3.7□□□□□ -1.82
MMP28-203ENST00000612672 PRM1P04553 51 aa3.41□□□□□ -1.86
MMP28-203ENST00000612672 MUC16Q8WXI7 14507 aa3.07□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms