RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
SSX3-204ENST00000612497 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
SSX3-204ENST00000612497 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SSX3-204ENST00000612497 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
SSX3-204ENST00000612497 SMIM20Q8N5G0 67 aa3.38□□□□□ -1.87
SSX3-204ENST00000612497 LOC105371267A0A1B0GV96 52 aa3.36□□□□□ -1.87
SSX3-204ENST00000612497 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
SSX3-204ENST00000612497 J3QR89 54 aa3.35□□□□□ -1.87
SSX3-204ENST00000612497 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
SSX3-204ENST00000612497 SEC61GP60059 68 aa3.33□□□□□ -1.88
SSX3-204ENST00000612497 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SSX3-204ENST00000612497 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
SSX3-204ENST00000612497 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
SSX3-204ENST00000612497 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
SSX3-204ENST00000612497 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
SSX3-204ENST00000612497 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SSX3-204ENST00000612497 PCP4L1A6NKN8 68 aa3.19□□□□□ -1.9
SSX3-204ENST00000612497 TNP1P09430 55 aa3.19□□□□□ -1.9
SSX3-204ENST00000612497 SMIM26A0A096LP01 95 aa3.17□□□□□ -1.9
SSX3-204ENST00000612497 A0A1B0GU33 70 aa3.17□□□□□ -1.9
SSX3-204ENST00000612497 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
SSX3-204ENST00000612497 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
SSX3-204ENST00000612497 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
SSX3-204ENST00000612497 COA5Q86WW8 74 aa3.11□□□□□ -1.91
SSX3-204ENST00000612497 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
SSX3-204ENST00000612497 A0A1B0GV90 55 aa3.06□□□□□ -1.92
SSX3-204ENST00000612497 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
SSX3-204ENST00000612497 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
SSX3-204ENST00000612497 SERP2Q8N6R1 65 aa3.05□□□□□ -1.92
SSX3-204ENST00000612497 K7ERU9 68 aa3.04□□□□□ -1.92
SSX3-204ENST00000612497 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
SSX3-204ENST00000612497 A0A1B0GU69 56 aa3.03□□□□□ -1.92
SSX3-204ENST00000612497 MT1AP04731 61 aa3.03□□□□□ -1.92
SSX3-204ENST00000612497 MT3P25713 68 aa3.03□□□□□ -1.92
SSX3-204ENST00000612497 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
SSX3-204ENST00000612497 A8MU10 97 aa2.91□□□□□ -1.94
SSX3-204ENST00000612497 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
SSX3-204ENST00000612497 COX7CP15954 63 aa2.86□□□□□ -1.95
SSX3-204ENST00000612497 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SSX3-204ENST00000612497 H7BZZ5 65 aa2.84□□□□□ -1.95
SSX3-204ENST00000612497 K7ERS5 55 aa2.82□□□□□ -1.96
SSX3-204ENST00000612497 UQCR11O14957 56 aa2.8□□□□□ -1.96
SSX3-204ENST00000612497 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
SSX3-204ENST00000612497 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
SSX3-204ENST00000612497 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
SSX3-204ENST00000612497 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
SSX3-204ENST00000612497 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
SSX3-204ENST00000612497 ANAPC13Q9BS18 74 aa2.62□□□□□ -1.99
SSX3-204ENST00000612497 V9GYY9 64 aa2.56□□□□□ -2
SSX3-204ENST00000612497 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
SSX3-204ENST00000612497 LCE1FQ5T754 118 aa2.54□□□□□ -2
SSX3-204ENST00000612497 TMEM258P61165 79 aa2.53□□□□□ -2
SSX3-204ENST00000612497 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SSX3-204ENST00000612497 Q1T7F1 81 aa2.46□□□□□ -2.02
SSX3-204ENST00000612497 CCDC179H3BU77 68 aa2.45□□□□□ -2.02
SSX3-204ENST00000612497 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SSX3-204ENST00000612497 ROMO1P60602 79 aa2.44□□□□□ -2.02
SSX3-204ENST00000612497 A6NED7 52 aa2.38□□□□□ -2.03
SSX3-204ENST00000612497 PSPHP1O15172 72 aa2.37□□□□□ -2.03
SSX3-204ENST00000612497 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
SSX3-204ENST00000612497 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SSX3-204ENST00000612497 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SSX3-204ENST00000612497 PCP4P48539 62 aa1.99□□□□□ -2.09
SSX3-204ENST00000612497 SVIPQ8NHG7 77 aa1.98□□□□□ -2.09
SSX3-204ENST00000612497 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SSX3-204ENST00000612497 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
SSX3-204ENST00000612497 BRK1Q8WUW1 75 aa1.86□□□□□ -2.11
SSX3-204ENST00000612497 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SSX3-204ENST00000612497 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
SSX3-204ENST00000612497 PRAC1Q96KF2 57 aa1.62□□□□□ -2.15
SSX3-204ENST00000612497 PMAIP1Q13794 54 aa1.6□□□□□ -2.15
SSX3-204ENST00000612497 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
SSX3-204ENST00000612497 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
SSX3-204ENST00000612497 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
SSX3-204ENST00000612497 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
SSX3-204ENST00000612497 PRM1P04553 51 aa1.16□□□□□ -2.22
SSX3-204ENST00000612497 INE1O15225 51 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 118.2 ms