RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 R4GN34 69 aa5.13□□□□□ -1.59
HLA-F-230ENST00000606273 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
HLA-F-230ENST00000606273 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
HLA-F-230ENST00000606273 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
HLA-F-230ENST00000606273 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
HLA-F-230ENST00000606273 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
HLA-F-230ENST00000606273 MT1XP80297 61 aa5□□□□□ -1.61
HLA-F-230ENST00000606273 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
HLA-F-230ENST00000606273 TMEM258P61165 79 aa4.99□□□□□ -1.61
HLA-F-230ENST00000606273 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
HLA-F-230ENST00000606273 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
HLA-F-230ENST00000606273 SEC61GP60059 68 aa4.94□□□□□ -1.62
HLA-F-230ENST00000606273 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
HLA-F-230ENST00000606273 A0A1B0GU33 70 aa4.91□□□□□ -1.62
HLA-F-230ENST00000606273 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
HLA-F-230ENST00000606273 A0A1B0GU69 56 aa4.9□□□□□ -1.63
HLA-F-230ENST00000606273 A8MU10 97 aa4.9□□□□□ -1.63
HLA-F-230ENST00000606273 A0A0D9SG42 100 aa4.87□□□□□ -1.63
HLA-F-230ENST00000606273 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
HLA-F-230ENST00000606273 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
HLA-F-230ENST00000606273 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
HLA-F-230ENST00000606273 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
HLA-F-230ENST00000606273 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
HLA-F-230ENST00000606273 PRR15LQ9BU68 103 aa4.77□□□□□ -1.65
HLA-F-230ENST00000606273 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
HLA-F-230ENST00000606273 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
HLA-F-230ENST00000606273 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
HLA-F-230ENST00000606273 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
HLA-F-230ENST00000606273 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
HLA-F-230ENST00000606273 MT4P47944 62 aa4.72□□□□□ -1.65
HLA-F-230ENST00000606273 Q1T7F1 81 aa4.68□□□□□ -1.66
HLA-F-230ENST00000606273 PSPHP1O15172 72 aa4.67□□□□□ -1.66
HLA-F-230ENST00000606273 UQCR11O14957 56 aa4.65□□□□□ -1.67
HLA-F-230ENST00000606273 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
HLA-F-230ENST00000606273 V9GYY9 64 aa4.62□□□□□ -1.67
HLA-F-230ENST00000606273 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
HLA-F-230ENST00000606273 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
HLA-F-230ENST00000606273 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
HLA-F-230ENST00000606273 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
HLA-F-230ENST00000606273 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
HLA-F-230ENST00000606273 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
HLA-F-230ENST00000606273 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
HLA-F-230ENST00000606273 A6NED7 52 aa4.47□□□□□ -1.69
HLA-F-230ENST00000606273 MT1EP04732 61 aa4.46□□□□□ -1.7
HLA-F-230ENST00000606273 TNP1P09430 55 aa4.43□□□□□ -1.7
HLA-F-230ENST00000606273 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
HLA-F-230ENST00000606273 MT1GP13640 62 aa4.39□□□□□ -1.71
HLA-F-230ENST00000606273 K7ERS5 55 aa4.37□□□□□ -1.71
HLA-F-230ENST00000606273 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
HLA-F-230ENST00000606273 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
HLA-F-230ENST00000606273 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
HLA-F-230ENST00000606273 MT1MQ8N339 61 aa4.29□□□□□ -1.72
HLA-F-230ENST00000606273 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
HLA-F-230ENST00000606273 MT1LQ93083 61 aa4.26□□□□□ -1.73
HLA-F-230ENST00000606273 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
HLA-F-230ENST00000606273 ROMO1P60602 79 aa4.2□□□□□ -1.74
HLA-F-230ENST00000606273 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
HLA-F-230ENST00000606273 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
HLA-F-230ENST00000606273 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
HLA-F-230ENST00000606273 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
HLA-F-230ENST00000606273 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
HLA-F-230ENST00000606273 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
HLA-F-230ENST00000606273 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
HLA-F-230ENST00000606273 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
HLA-F-230ENST00000606273 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
HLA-F-230ENST00000606273 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
HLA-F-230ENST00000606273 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
HLA-F-230ENST00000606273 MT1AP04731 61 aa3.61□□□□□ -1.83
HLA-F-230ENST00000606273 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
HLA-F-230ENST00000606273 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
HLA-F-230ENST00000606273 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
HLA-F-230ENST00000606273 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
HLA-F-230ENST00000606273 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
HLA-F-230ENST00000606273 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
HLA-F-230ENST00000606273 PRM1P04553 51 aa2.19□□□□□ -2.06
HLA-F-230ENST00000606273 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
HLA-F-230ENST00000606273 INE1O15225 51 aa2.12□□□□□ -2.07
HLA-F-230ENST00000606273 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 196 ms