RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 TNP1P09430 55 aa6.48□□□□□ -1.37
CCDC12-213ENST00000605875 MT1MQ8N339 61 aa6.46□□□□□ -1.38
CCDC12-213ENST00000605875 MT1LQ93083 61 aa6.45□□□□□ -1.38
CCDC12-213ENST00000605875 AHNAK2Q8IVF2 5795 aa6.44□□□□□ -1.38
CCDC12-213ENST00000605875 TMEM258P61165 79 aa6.44□□□□□ -1.38
CCDC12-213ENST00000605875 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
CCDC12-213ENST00000605875 KRTAP5-10Q6L8G5 202 aa6.35□□□□□ -1.39
CCDC12-213ENST00000605875 UQCR11O14957 56 aa6.34□□□□□ -1.39
CCDC12-213ENST00000605875 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
CCDC12-213ENST00000605875 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
CCDC12-213ENST00000605875 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
CCDC12-213ENST00000605875 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
CCDC12-213ENST00000605875 KRTAP5-7Q6L8G8 165 aa6.16□□□□□ -1.42
CCDC12-213ENST00000605875 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
CCDC12-213ENST00000605875 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
CCDC12-213ENST00000605875 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CCDC12-213ENST00000605875 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
CCDC12-213ENST00000605875 K7ERS5 55 aa6.08□□□□□ -1.44
CCDC12-213ENST00000605875 V9GYY9 64 aa6.06□□□□□ -1.44
CCDC12-213ENST00000605875 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CCDC12-213ENST00000605875 Q1T7F1 81 aa6.02□□□□□ -1.45
CCDC12-213ENST00000605875 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
CCDC12-213ENST00000605875 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
CCDC12-213ENST00000605875 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
CCDC12-213ENST00000605875 A6NED7 52 aa5.89□□□□□ -1.47
CCDC12-213ENST00000605875 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CCDC12-213ENST00000605875 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
CCDC12-213ENST00000605875 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CCDC12-213ENST00000605875 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
CCDC12-213ENST00000605875 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CCDC12-213ENST00000605875 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
CCDC12-213ENST00000605875 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
CCDC12-213ENST00000605875 ROMO1P60602 79 aa5.68□□□□□ -1.5
CCDC12-213ENST00000605875 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
CCDC12-213ENST00000605875 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
CCDC12-213ENST00000605875 PCP4P48539 62 aa5.56□□□□□ -1.52
CCDC12-213ENST00000605875 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
CCDC12-213ENST00000605875 MT1AP04731 61 aa5.49□□□□□ -1.53
CCDC12-213ENST00000605875 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
CCDC12-213ENST00000605875 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
CCDC12-213ENST00000605875 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
CCDC12-213ENST00000605875 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
CCDC12-213ENST00000605875 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
CCDC12-213ENST00000605875 MUC5BQ9HC84 5762 aaPredicted RBP5.33□□□□□ -1.56
CCDC12-213ENST00000605875 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CCDC12-213ENST00000605875 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
CCDC12-213ENST00000605875 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
CCDC12-213ENST00000605875 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
CCDC12-213ENST00000605875 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
CCDC12-213ENST00000605875 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
CCDC12-213ENST00000605875 MT3P25713 68 aa5□□□□□ -1.61
CCDC12-213ENST00000605875 PMAIP1Q13794 54 aa4.66□□□□□ -1.66
CCDC12-213ENST00000605875 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
CCDC12-213ENST00000605875 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CCDC12-213ENST00000605875 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
CCDC12-213ENST00000605875 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
CCDC12-213ENST00000605875 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
CCDC12-213ENST00000605875 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CCDC12-213ENST00000605875 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CCDC12-213ENST00000605875 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
CCDC12-213ENST00000605875 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CCDC12-213ENST00000605875 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
CCDC12-213ENST00000605875 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
CCDC12-213ENST00000605875 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
CCDC12-213ENST00000605875 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
CCDC12-213ENST00000605875 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CCDC12-213ENST00000605875 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CCDC12-213ENST00000605875 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
CCDC12-213ENST00000605875 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
CCDC12-213ENST00000605875 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CCDC12-213ENST00000605875 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
CCDC12-213ENST00000605875 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CCDC12-213ENST00000605875 PRM1P04553 51 aa2.93□□□□□ -1.94
CCDC12-213ENST00000605875 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
CCDC12-213ENST00000605875 A0A0A0MQY5 61 aa2.57□□□□□ -2
CCDC12-213ENST00000605875 INE1O15225 51 aa2.52□□□□□ -2.01
CCDC12-213ENST00000605875 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
CCDC12-213ENST00000605875 H3BS24 57 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 27.3 ms