RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 SEC61GP60059 68 aa5.58□□□□□ -1.52
CCDC12-210ENST00000604181 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
CCDC12-210ENST00000604181 TNP1P09430 55 aa5.52□□□□□ -1.53
CCDC12-210ENST00000604181 A8MU10 97 aa5.51□□□□□ -1.53
CCDC12-210ENST00000604181 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
CCDC12-210ENST00000604181 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
CCDC12-210ENST00000604181 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CCDC12-210ENST00000604181 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
CCDC12-210ENST00000604181 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
CCDC12-210ENST00000604181 K7ERU9 68 aa5.31□□□□□ -1.56
CCDC12-210ENST00000604181 A0A1B0GU69 56 aa5.3□□□□□ -1.56
CCDC12-210ENST00000604181 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
CCDC12-210ENST00000604181 H7BZZ5 65 aa5.22□□□□□ -1.57
CCDC12-210ENST00000604181 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
CCDC12-210ENST00000604181 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
CCDC12-210ENST00000604181 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
CCDC12-210ENST00000604181 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
CCDC12-210ENST00000604181 COX7CP15954 63 aa5.15□□□□□ -1.59
CCDC12-210ENST00000604181 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CCDC12-210ENST00000604181 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
CCDC12-210ENST00000604181 MT1AP04731 61 aa5.04□□□□□ -1.6
CCDC12-210ENST00000604181 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CCDC12-210ENST00000604181 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
CCDC12-210ENST00000604181 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
CCDC12-210ENST00000604181 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
CCDC12-210ENST00000604181 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
CCDC12-210ENST00000604181 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
CCDC12-210ENST00000604181 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
CCDC12-210ENST00000604181 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
CCDC12-210ENST00000604181 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
CCDC12-210ENST00000604181 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
CCDC12-210ENST00000604181 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
CCDC12-210ENST00000604181 UQCR11O14957 56 aa4.81□□□□□ -1.64
CCDC12-210ENST00000604181 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
CCDC12-210ENST00000604181 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
CCDC12-210ENST00000604181 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
CCDC12-210ENST00000604181 ANAPC13Q9BS18 74 aa4.7□□□□□ -1.66
CCDC12-210ENST00000604181 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CCDC12-210ENST00000604181 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
CCDC12-210ENST00000604181 K7ERS5 55 aa4.59□□□□□ -1.67
CCDC12-210ENST00000604181 MT3P25713 68 aa4.59□□□□□ -1.67
CCDC12-210ENST00000604181 PSPHP1O15172 72 aa4.4□□□□□ -1.71
CCDC12-210ENST00000604181 TMEM258P61165 79 aa4.4□□□□□ -1.71
CCDC12-210ENST00000604181 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
CCDC12-210ENST00000604181 Q1T7F1 81 aa4.36□□□□□ -1.71
CCDC12-210ENST00000604181 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
CCDC12-210ENST00000604181 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CCDC12-210ENST00000604181 ROMO1P60602 79 aa4.28□□□□□ -1.72
CCDC12-210ENST00000604181 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
CCDC12-210ENST00000604181 V9GYY9 64 aa4.2□□□□□ -1.74
CCDC12-210ENST00000604181 A6NED7 52 aa4.17□□□□□ -1.74
CCDC12-210ENST00000604181 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CCDC12-210ENST00000604181 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CCDC12-210ENST00000604181 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CCDC12-210ENST00000604181 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CCDC12-210ENST00000604181 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CCDC12-210ENST00000604181 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CCDC12-210ENST00000604181 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
CCDC12-210ENST00000604181 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
CCDC12-210ENST00000604181 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CCDC12-210ENST00000604181 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
CCDC12-210ENST00000604181 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CCDC12-210ENST00000604181 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CCDC12-210ENST00000604181 PCP4P48539 62 aa3.14□□□□□ -1.91
CCDC12-210ENST00000604181 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
CCDC12-210ENST00000604181 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
CCDC12-210ENST00000604181 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
CCDC12-210ENST00000604181 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CCDC12-210ENST00000604181 PRO0628Q9UI54 55 aa2.55□□□□□ -2
CCDC12-210ENST00000604181 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CCDC12-210ENST00000604181 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
CCDC12-210ENST00000604181 SVIPQ8NHG7 77 aa2.26□□□□□ -2.05
CCDC12-210ENST00000604181 PRM1P04553 51 aa2.2□□□□□ -2.06
CCDC12-210ENST00000604181 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
CCDC12-210ENST00000604181 NDUFAF8A1L188 74 aa1.8□□□□□ -2.12
CCDC12-210ENST00000604181 A0A0A0MQY5 61 aa1.63□□□□□ -2.15
CCDC12-210ENST00000604181 INE1O15225 51 aa1.55□□□□□ -2.16
CCDC12-210ENST00000604181 H3BS24 57 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms