RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 UQCR11O14957 56 aa6.3□□□□□ -1.4
CCDC12-208ENST00000603885 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
CCDC12-208ENST00000603885 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
CCDC12-208ENST00000603885 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
CCDC12-208ENST00000603885 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
CCDC12-208ENST00000603885 MT4P47944 62 aa6.22□□□□□ -1.41
CCDC12-208ENST00000603885 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
CCDC12-208ENST00000603885 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
CCDC12-208ENST00000603885 KRTAP5-4Q6L8H1 288 aa6.15□□□□□ -1.42
CCDC12-208ENST00000603885 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CCDC12-208ENST00000603885 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
CCDC12-208ENST00000603885 K7ERS5 55 aa6.07□□□□□ -1.44
CCDC12-208ENST00000603885 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
CCDC12-208ENST00000603885 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CCDC12-208ENST00000603885 V9GYY9 64 aa6.02□□□□□ -1.45
CCDC12-208ENST00000603885 PSPHP1O15172 72 aa5.99□□□□□ -1.45
CCDC12-208ENST00000603885 Q1T7F1 81 aa5.95□□□□□ -1.46
CCDC12-208ENST00000603885 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
CCDC12-208ENST00000603885 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
CCDC12-208ENST00000603885 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
CCDC12-208ENST00000603885 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
CCDC12-208ENST00000603885 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
CCDC12-208ENST00000603885 A6NED7 52 aa5.8□□□□□ -1.48
CCDC12-208ENST00000603885 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
CCDC12-208ENST00000603885 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
CCDC12-208ENST00000603885 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
CCDC12-208ENST00000603885 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
CCDC12-208ENST00000603885 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
CCDC12-208ENST00000603885 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
CCDC12-208ENST00000603885 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
CCDC12-208ENST00000603885 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
CCDC12-208ENST00000603885 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
CCDC12-208ENST00000603885 ROMO1P60602 79 aa5.62□□□□□ -1.51
CCDC12-208ENST00000603885 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
CCDC12-208ENST00000603885 MT1AP04731 61 aa5.49□□□□□ -1.53
CCDC12-208ENST00000603885 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CCDC12-208ENST00000603885 PCP4P48539 62 aa5.38□□□□□ -1.55
CCDC12-208ENST00000603885 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CCDC12-208ENST00000603885 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
CCDC12-208ENST00000603885 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
CCDC12-208ENST00000603885 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CCDC12-208ENST00000603885 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CCDC12-208ENST00000603885 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CCDC12-208ENST00000603885 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
CCDC12-208ENST00000603885 MT3P25713 68 aa5.03□□□□□ -1.6
CCDC12-208ENST00000603885 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
CCDC12-208ENST00000603885 MUC5BQ9HC84 5762 aaPredicted RBP4.97□□□□□ -1.61
CCDC12-208ENST00000603885 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
CCDC12-208ENST00000603885 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
CCDC12-208ENST00000603885 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
CCDC12-208ENST00000603885 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
CCDC12-208ENST00000603885 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
CCDC12-208ENST00000603885 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
CCDC12-208ENST00000603885 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
CCDC12-208ENST00000603885 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
CCDC12-208ENST00000603885 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
CCDC12-208ENST00000603885 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
CCDC12-208ENST00000603885 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
CCDC12-208ENST00000603885 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
CCDC12-208ENST00000603885 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
CCDC12-208ENST00000603885 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CCDC12-208ENST00000603885 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
CCDC12-208ENST00000603885 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
CCDC12-208ENST00000603885 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
CCDC12-208ENST00000603885 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CCDC12-208ENST00000603885 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
CCDC12-208ENST00000603885 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CCDC12-208ENST00000603885 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
CCDC12-208ENST00000603885 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
CCDC12-208ENST00000603885 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
CCDC12-208ENST00000603885 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CCDC12-208ENST00000603885 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
CCDC12-208ENST00000603885 PRM1P04553 51 aa2.87□□□□□ -1.95
CCDC12-208ENST00000603885 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CCDC12-208ENST00000603885 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
CCDC12-208ENST00000603885 H3BS24 57 aa2.31□□□□□ -2.04
CCDC12-208ENST00000603885 INE1O15225 51 aa2.29□□□□□ -2.04
CCDC12-208ENST00000603885 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms