RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 NISCHQ9Y2I1 1504 aa44.71■■■■■ 4.75
CCDC12-208ENST00000603885 CCDC180Q9P1Z9 1646 aa39.97■■■■□ 3.99
CCDC12-208ENST00000603885 ABCC9O60706 1549 aa39.53■■■■□ 3.92
CCDC12-208ENST00000603885 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
CCDC12-208ENST00000603885 NACADO15069 1562 aa37.68■■■■□ 3.62
CCDC12-208ENST00000603885 DCAF8L2P0C7V8 631 aa37.55■■■■□ 3.6
CCDC12-208ENST00000603885 MYO15BQ96JP2 1530 aa37.31■■■■□ 3.56
CCDC12-208ENST00000603885 ZCCHC6Q5VYS8 1495 aaKnown RBP37.15■■■■□ 3.54
CCDC12-208ENST00000603885 DCAF1Q9Y4B6 1507 aa36.98■■■■□ 3.51
CCDC12-208ENST00000603885 UNC13AQ9UPW8 1703 aa36.94■■■■□ 3.5
CCDC12-208ENST00000603885 PABPN1Q86U42 306 aaKnown RBP eCLIP36.85■■■■□ 3.49
CCDC12-208ENST00000603885 BICRAQ9NZM4 1560 aa36.68■■■■□ 3.46
CCDC12-208ENST00000603885 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
CCDC12-208ENST00000603885 SCRIBQ14160 1630 aa36.42■■■■□ 3.42
CCDC12-208ENST00000603885 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
CCDC12-208ENST00000603885 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.32
CCDC12-208ENST00000603885 CC2D2AQ9P2K1 1620 aa35.73■■■■□ 3.31
CCDC12-208ENST00000603885 CECR2Q9BXF3 1484 aa35.57■■■■□ 3.28
CCDC12-208ENST00000603885 SMARCA4P51532 1647 aa34.8■■■■□ 3.16
CCDC12-208ENST00000603885 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
CCDC12-208ENST00000603885 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
CCDC12-208ENST00000603885 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.15
CCDC12-208ENST00000603885 SMARCA2P51531 1590 aa34.67■■■■□ 3.14
CCDC12-208ENST00000603885 HMGXB3Q12766 1538 aa34.56■■■■□ 3.12
CCDC12-208ENST00000603885 PEG3Q9GZU2 1588 aa34.46■■■■□ 3.11
CCDC12-208ENST00000603885 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
CCDC12-208ENST00000603885 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
CCDC12-208ENST00000603885 ERCC6Q03468 1493 aa34.13■■■■□ 3.05
CCDC12-208ENST00000603885 NESP48681 1621 aa34.06■■■■□ 3.04
CCDC12-208ENST00000603885 WIZO95785 1651 aa34.05■■■■□ 3.04
CCDC12-208ENST00000603885 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
CCDC12-208ENST00000603885 CUX2O14529 1486 aa33.92■■■■□ 3.02
CCDC12-208ENST00000603885 RSF1Q96T23 1441 aaPredicted RBP33.89■■■■□ 3.02
CCDC12-208ENST00000603885 CADPSQ9ULU8 1353 aa33.73■■■□□ 2.99
CCDC12-208ENST00000603885 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
CCDC12-208ENST00000603885 TOP2AP11388 1531 aaKnown RBP33.68■■■□□ 2.98
CCDC12-208ENST00000603885 KIF21AQ7Z4S6 1674 aa33.65■■■□□ 2.98
CCDC12-208ENST00000603885 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
CCDC12-208ENST00000603885 CFTRP13569 1480 aa33.44■■■□□ 2.94
CCDC12-208ENST00000603885 MRC2Q9UBG0 1479 aa33.4■■■□□ 2.94
CCDC12-208ENST00000603885 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
CCDC12-208ENST00000603885 CEP164Q9UPV0 1460 aa33.37■■■□□ 2.93
CCDC12-208ENST00000603885 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
CCDC12-208ENST00000603885 WDR62O43379 1518 aa33.3■■■□□ 2.92
CCDC12-208ENST00000603885 CCDC88BA6NC98 1476 aa33.27■■■□□ 2.92
CCDC12-208ENST00000603885 PRDM2Q13029 1718 aa33.15■■■□□ 2.9
CCDC12-208ENST00000603885 URB2Q14146 1524 aaKnown RBP33.03■■■□□ 2.88
CCDC12-208ENST00000603885 TOPBP1Q92547 1522 aa32.76■■■□□ 2.83
CCDC12-208ENST00000603885 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
CCDC12-208ENST00000603885 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
CCDC12-208ENST00000603885 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.82
CCDC12-208ENST00000603885 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
CCDC12-208ENST00000603885 ZNF608Q9ULD9 1512 aaPredicted RBP32.55■■■□□ 2.8
CCDC12-208ENST00000603885 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
CCDC12-208ENST00000603885 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
CCDC12-208ENST00000603885 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
CCDC12-208ENST00000603885 EIF4G3O43432 1585 aaKnown RBP32.42■■■□□ 2.78
CCDC12-208ENST00000603885 CUX1P39880 1505 aa32.35■■■□□ 2.77
CCDC12-208ENST00000603885 SOGA1O94964 1423 aa32.32■■■□□ 2.76
CCDC12-208ENST00000603885 AQRO60306 1485 aaKnown RBP eCLIP32.31■■■□□ 2.761e-7■■■■□ 20.4
CCDC12-208ENST00000603885 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
CCDC12-208ENST00000603885 RAD54L2Q9Y4B4 1467 aa32.31■■■□□ 2.76
CCDC12-208ENST00000603885 TDRD9Q8NDG6 1382 aaKnown RBP32.19■■■□□ 2.74
CCDC12-208ENST00000603885 WDR97A6NE52 1622 aa32.18■■■□□ 2.74
CCDC12-208ENST00000603885 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
CCDC12-208ENST00000603885 CHD1O14646 1710 aa32.09■■■□□ 2.73
CCDC12-208ENST00000603885 FBLN2P98095 1184 aa32.04■■■□□ 2.72
CCDC12-208ENST00000603885 SNAPC4Q5SXM2 1469 aa32.02■■■□□ 2.72
CCDC12-208ENST00000603885 GRIN2BQ13224 1484 aa32■■■□□ 2.71
CCDC12-208ENST00000603885 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
CCDC12-208ENST00000603885 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
CCDC12-208ENST00000603885 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
CCDC12-208ENST00000603885 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
CCDC12-208ENST00000603885 RIMBP3CA6NJZ7 1639 aa31.95■■■□□ 2.71
CCDC12-208ENST00000603885 RIMBP3BA6NNM3 1639 aa31.95■■■□□ 2.71
CCDC12-208ENST00000603885 RIMBP3Q9UFD9 1639 aa31.95■■■□□ 2.71
CCDC12-208ENST00000603885 BIVM-ERCC5R4GMW8 1640 aa31.95■■■□□ 2.71
CCDC12-208ENST00000603885 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
CCDC12-208ENST00000603885 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
CCDC12-208ENST00000603885 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
CCDC12-208ENST00000603885 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
CCDC12-208ENST00000603885 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
CCDC12-208ENST00000603885 CHMP7Q8WUX9 453 aaPredicted RBP31.88■■■□□ 2.69
CCDC12-208ENST00000603885 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
CCDC12-208ENST00000603885 CLASP1Q7Z460 1538 aa31.74■■■□□ 2.67
CCDC12-208ENST00000603885 CYB5RLQ6IPT4 315 aa31.63■■■□□ 2.65
CCDC12-208ENST00000603885 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
CCDC12-208ENST00000603885 ARAP1Q96P48 1450 aa31.61■■■□□ 2.65
CCDC12-208ENST00000603885 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
CCDC12-208ENST00000603885 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
CCDC12-208ENST00000603885 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
CCDC12-208ENST00000603885 NUP160Q12769 1436 aa31.46■■■□□ 2.63
CCDC12-208ENST00000603885 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
CCDC12-208ENST00000603885 KIF27Q86VH2 1401 aa31.36■■■□□ 2.61
CCDC12-208ENST00000603885 SHROOM2Q13796 1616 aa31.27■■■□□ 2.6
CCDC12-208ENST00000603885 IGF1RP08069 1367 aa31.26■■■□□ 2.59
CCDC12-208ENST00000603885 ERCC6L2Q5T890 1561 aa31.25■■■□□ 2.59
CCDC12-208ENST00000603885 CUL7Q14999 1698 aa31.23■■■□□ 2.59
CCDC12-208ENST00000603885 RUSC2Q8N2Y8 1516 aa31.17■■■□□ 2.58
CCDC12-208ENST00000603885 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms