RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 V9GYY9 64 aa7.72□□□□□ -1.17
PPFIA3-208ENST00000602726 PSPHP1O15172 72 aa7.68□□□□□ -1.18
PPFIA3-208ENST00000602726 K7ERS5 55 aa7.66□□□□□ -1.18
PPFIA3-208ENST00000602726 Q1T7F1 81 aa7.65□□□□□ -1.18
PPFIA3-208ENST00000602726 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
PPFIA3-208ENST00000602726 KRTAP4-9Q9BYQ8 210 aa7.6□□□□□ -1.19
PPFIA3-208ENST00000602726 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
PPFIA3-208ENST00000602726 KRTAP4-3Q9BYR4 195 aa7.56□□□□□ -1.2
PPFIA3-208ENST00000602726 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
PPFIA3-208ENST00000602726 A6NED7 52 aa7.43□□□□□ -1.22
PPFIA3-208ENST00000602726 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
PPFIA3-208ENST00000602726 GPR98Q8WXG9 6306 aa7.43□□□□□ -1.22
PPFIA3-208ENST00000602726 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
PPFIA3-208ENST00000602726 MT4P47944 62 aa7.38□□□□□ -1.23
PPFIA3-208ENST00000602726 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
PPFIA3-208ENST00000602726 KRTAP5-4Q6L8H1 288 aa7.31□□□□□ -1.24
PPFIA3-208ENST00000602726 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
PPFIA3-208ENST00000602726 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
PPFIA3-208ENST00000602726 PCP4P48539 62 aa7.24□□□□□ -1.25
PPFIA3-208ENST00000602726 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
PPFIA3-208ENST00000602726 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
PPFIA3-208ENST00000602726 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
PPFIA3-208ENST00000602726 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
PPFIA3-208ENST00000602726 ROMO1P60602 79 aa7.12□□□□□ -1.27
PPFIA3-208ENST00000602726 AHNAK2Q8IVF2 5795 aa7.09□□□□□ -1.27
PPFIA3-208ENST00000602726 KRTAP5-5Q701N2 237 aaPredicted RBP7.07□□□□□ -1.28
PPFIA3-208ENST00000602726 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
PPFIA3-208ENST00000602726 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
PPFIA3-208ENST00000602726 KRTAP12-4P60329 112 aa6.92□□□□□ -1.3
PPFIA3-208ENST00000602726 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
PPFIA3-208ENST00000602726 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
PPFIA3-208ENST00000602726 KRTAP5-10Q6L8G5 202 aa6.84□□□□□ -1.31
PPFIA3-208ENST00000602726 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
PPFIA3-208ENST00000602726 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
PPFIA3-208ENST00000602726 MT1AP04731 61 aa6.63□□□□□ -1.35
PPFIA3-208ENST00000602726 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
PPFIA3-208ENST00000602726 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
PPFIA3-208ENST00000602726 KRTAP5-7Q6L8G8 165 aa6.57□□□□□ -1.36
PPFIA3-208ENST00000602726 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
PPFIA3-208ENST00000602726 KRTAP5-2Q701N4 177 aa6.42□□□□□ -1.38
PPFIA3-208ENST00000602726 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
PPFIA3-208ENST00000602726 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
PPFIA3-208ENST00000602726 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
PPFIA3-208ENST00000602726 MT3P25713 68 aa6.08□□□□□ -1.44
PPFIA3-208ENST00000602726 KRTAP5-8O75690 187 aa6.07□□□□□ -1.44
PPFIA3-208ENST00000602726 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
PPFIA3-208ENST00000602726 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
PPFIA3-208ENST00000602726 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
PPFIA3-208ENST00000602726 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
PPFIA3-208ENST00000602726 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
PPFIA3-208ENST00000602726 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
PPFIA3-208ENST00000602726 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
PPFIA3-208ENST00000602726 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
PPFIA3-208ENST00000602726 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
PPFIA3-208ENST00000602726 LCE1EQ5T753 118 aa5.55□□□□□ -1.52
PPFIA3-208ENST00000602726 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
PPFIA3-208ENST00000602726 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
PPFIA3-208ENST00000602726 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
PPFIA3-208ENST00000602726 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
PPFIA3-208ENST00000602726 LCE1CQ5T751 118 aa5.15□□□□□ -1.59
PPFIA3-208ENST00000602726 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
PPFIA3-208ENST00000602726 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
PPFIA3-208ENST00000602726 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
PPFIA3-208ENST00000602726 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
PPFIA3-208ENST00000602726 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
PPFIA3-208ENST00000602726 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
PPFIA3-208ENST00000602726 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
PPFIA3-208ENST00000602726 H3BS24 57 aa4.34□□□□□ -1.71
PPFIA3-208ENST00000602726 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
PPFIA3-208ENST00000602726 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
PPFIA3-208ENST00000602726 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
PPFIA3-208ENST00000602726 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
PPFIA3-208ENST00000602726 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.81
PPFIA3-208ENST00000602726 PRM1P04553 51 aa3.64□□□□□ -1.83
PPFIA3-208ENST00000602726 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
PPFIA3-208ENST00000602726 INE1O15225 51 aa3.17□□□□□ -1.9
PPFIA3-208ENST00000602726 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
PPFIA3-208ENST00000602726 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 63.9 ms