RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 TNP1P09430 55 aa7.1□□□□□ -1.27
ARHGEF1-217ENST00000598812 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
ARHGEF1-217ENST00000598812 PSPHP1O15172 72 aa7.05□□□□□ -1.28
ARHGEF1-217ENST00000598812 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
ARHGEF1-217ENST00000598812 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
ARHGEF1-217ENST00000598812 MT1LQ93083 61 aa7.03□□□□□ -1.28
ARHGEF1-217ENST00000598812 V9GYY9 64 aa7.03□□□□□ -1.28
ARHGEF1-217ENST00000598812 MT1MQ8N339 61 aa7.02□□□□□ -1.29
ARHGEF1-217ENST00000598812 Q1T7F1 81 aa7□□□□□ -1.29
ARHGEF1-217ENST00000598812 MT4P47944 62 aa6.96□□□□□ -1.3
ARHGEF1-217ENST00000598812 LCE4AQ5TA78 99 aa6.92□□□□□ -1.3
ARHGEF1-217ENST00000598812 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
ARHGEF1-217ENST00000598812 K7ERS5 55 aa6.88□□□□□ -1.31
ARHGEF1-217ENST00000598812 PCP4P48539 62 aa6.88□□□□□ -1.31
ARHGEF1-217ENST00000598812 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
ARHGEF1-217ENST00000598812 A6NED7 52 aa6.8□□□□□ -1.32
ARHGEF1-217ENST00000598812 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
ARHGEF1-217ENST00000598812 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
ARHGEF1-217ENST00000598812 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
ARHGEF1-217ENST00000598812 KRTAP5-4Q6L8H1 288 aa6.72□□□□□ -1.33
ARHGEF1-217ENST00000598812 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
ARHGEF1-217ENST00000598812 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
ARHGEF1-217ENST00000598812 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
ARHGEF1-217ENST00000598812 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
ARHGEF1-217ENST00000598812 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
ARHGEF1-217ENST00000598812 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
ARHGEF1-217ENST00000598812 ROMO1P60602 79 aa6.45□□□□□ -1.38
ARHGEF1-217ENST00000598812 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
ARHGEF1-217ENST00000598812 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
ARHGEF1-217ENST00000598812 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
ARHGEF1-217ENST00000598812 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
ARHGEF1-217ENST00000598812 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
ARHGEF1-217ENST00000598812 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
ARHGEF1-217ENST00000598812 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
ARHGEF1-217ENST00000598812 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
ARHGEF1-217ENST00000598812 AHNAKQ09666 5890 aaKnown RBP6.15□□□□□ -1.43
ARHGEF1-217ENST00000598812 MUC5ACP98088 5654 aa6.08□□□□□ -1.44
ARHGEF1-217ENST00000598812 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
ARHGEF1-217ENST00000598812 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
ARHGEF1-217ENST00000598812 MT1AP04731 61 aa5.98□□□□□ -1.45
ARHGEF1-217ENST00000598812 MUC5BQ9HC84 5762 aaPredicted RBP5.94□□□□□ -1.46
ARHGEF1-217ENST00000598812 KRTAP6-1Q3LI64 71 aa5.94□□□□□ -1.46
ARHGEF1-217ENST00000598812 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
ARHGEF1-217ENST00000598812 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
ARHGEF1-217ENST00000598812 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
ARHGEF1-217ENST00000598812 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
ARHGEF1-217ENST00000598812 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
ARHGEF1-217ENST00000598812 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
ARHGEF1-217ENST00000598812 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
ARHGEF1-217ENST00000598812 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
ARHGEF1-217ENST00000598812 MT3P25713 68 aa5.49□□□□□ -1.53
ARHGEF1-217ENST00000598812 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
ARHGEF1-217ENST00000598812 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
ARHGEF1-217ENST00000598812 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
ARHGEF1-217ENST00000598812 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
ARHGEF1-217ENST00000598812 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
ARHGEF1-217ENST00000598812 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
ARHGEF1-217ENST00000598812 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
ARHGEF1-217ENST00000598812 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
ARHGEF1-217ENST00000598812 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
ARHGEF1-217ENST00000598812 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
ARHGEF1-217ENST00000598812 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
ARHGEF1-217ENST00000598812 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
ARHGEF1-217ENST00000598812 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
ARHGEF1-217ENST00000598812 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
ARHGEF1-217ENST00000598812 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
ARHGEF1-217ENST00000598812 H3BS24 57 aa4.14□□□□□ -1.75
ARHGEF1-217ENST00000598812 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
ARHGEF1-217ENST00000598812 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
ARHGEF1-217ENST00000598812 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
ARHGEF1-217ENST00000598812 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
ARHGEF1-217ENST00000598812 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
ARHGEF1-217ENST00000598812 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
ARHGEF1-217ENST00000598812 PRM1P04553 51 aa3.33□□□□□ -1.88
ARHGEF1-217ENST00000598812 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
ARHGEF1-217ENST00000598812 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
ARHGEF1-217ENST00000598812 INE1O15225 51 aa3□□□□□ -1.93
ARHGEF1-217ENST00000598812 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms