RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 A0A1B0GU33 70 aa3.86□□□□□ -1.79
GRAMD1A-209ENST00000598580 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
GRAMD1A-209ENST00000598580 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
GRAMD1A-209ENST00000598580 PCP4P48539 62 aa3.82□□□□□ -1.8
GRAMD1A-209ENST00000598580 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
GRAMD1A-209ENST00000598580 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
GRAMD1A-209ENST00000598580 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
GRAMD1A-209ENST00000598580 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
GRAMD1A-209ENST00000598580 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
GRAMD1A-209ENST00000598580 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
GRAMD1A-209ENST00000598580 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
GRAMD1A-209ENST00000598580 TNP1P09430 55 aa3.73□□□□□ -1.81
GRAMD1A-209ENST00000598580 V9GYY9 64 aa3.73□□□□□ -1.81
GRAMD1A-209ENST00000598580 A8MU10 97 aa3.71□□□□□ -1.82
GRAMD1A-209ENST00000598580 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
GRAMD1A-209ENST00000598580 Q1T7F1 81 aa3.71□□□□□ -1.82
GRAMD1A-209ENST00000598580 UQCR11O14957 56 aa3.69□□□□□ -1.82
GRAMD1A-209ENST00000598580 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
GRAMD1A-209ENST00000598580 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
GRAMD1A-209ENST00000598580 PSPHP1O15172 72 aa3.64□□□□□ -1.83
GRAMD1A-209ENST00000598580 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
GRAMD1A-209ENST00000598580 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
GRAMD1A-209ENST00000598580 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
GRAMD1A-209ENST00000598580 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
GRAMD1A-209ENST00000598580 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
GRAMD1A-209ENST00000598580 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
GRAMD1A-209ENST00000598580 A6NED7 52 aa3.53□□□□□ -1.84
GRAMD1A-209ENST00000598580 K7ERS5 55 aa3.52□□□□□ -1.85
GRAMD1A-209ENST00000598580 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
GRAMD1A-209ENST00000598580 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
GRAMD1A-209ENST00000598580 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
GRAMD1A-209ENST00000598580 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
GRAMD1A-209ENST00000598580 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
GRAMD1A-209ENST00000598580 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
GRAMD1A-209ENST00000598580 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
GRAMD1A-209ENST00000598580 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
GRAMD1A-209ENST00000598580 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
GRAMD1A-209ENST00000598580 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
GRAMD1A-209ENST00000598580 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
GRAMD1A-209ENST00000598580 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
GRAMD1A-209ENST00000598580 MT1AP04731 61 aa3.31□□□□□ -1.88
GRAMD1A-209ENST00000598580 ROMO1P60602 79 aa3.31□□□□□ -1.88
GRAMD1A-209ENST00000598580 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
GRAMD1A-209ENST00000598580 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
GRAMD1A-209ENST00000598580 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
GRAMD1A-209ENST00000598580 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
GRAMD1A-209ENST00000598580 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
GRAMD1A-209ENST00000598580 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
GRAMD1A-209ENST00000598580 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
GRAMD1A-209ENST00000598580 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
GRAMD1A-209ENST00000598580 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
GRAMD1A-209ENST00000598580 MT3P25713 68 aa3.01□□□□□ -1.93
GRAMD1A-209ENST00000598580 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
GRAMD1A-209ENST00000598580 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
GRAMD1A-209ENST00000598580 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
GRAMD1A-209ENST00000598580 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
GRAMD1A-209ENST00000598580 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
GRAMD1A-209ENST00000598580 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
GRAMD1A-209ENST00000598580 SVIPQ8NHG7 77 aa2.66□□□□□ -1.98
GRAMD1A-209ENST00000598580 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
GRAMD1A-209ENST00000598580 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
GRAMD1A-209ENST00000598580 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
GRAMD1A-209ENST00000598580 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
GRAMD1A-209ENST00000598580 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
GRAMD1A-209ENST00000598580 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
GRAMD1A-209ENST00000598580 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
GRAMD1A-209ENST00000598580 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
GRAMD1A-209ENST00000598580 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
GRAMD1A-209ENST00000598580 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
GRAMD1A-209ENST00000598580 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
GRAMD1A-209ENST00000598580 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
GRAMD1A-209ENST00000598580 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
GRAMD1A-209ENST00000598580 A0A0A0MQY5 61 aa1.79□□□□□ -2.12
GRAMD1A-209ENST00000598580 INE1O15225 51 aa1.77□□□□□ -2.13
GRAMD1A-209ENST00000598580 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
GRAMD1A-209ENST00000598580 PRM1P04553 51 aa1.69□□□□□ -2.14
GRAMD1A-209ENST00000598580 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
GRAMD1A-209ENST00000598580 H3BS24 57 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms