RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 Q1T7F1 81 aa6.85□□□□□ -1.31
HOMER3-209ENST00000596482 MT1LQ93083 61 aa6.84□□□□□ -1.31
HOMER3-209ENST00000596482 MT1MQ8N339 61 aa6.79□□□□□ -1.32
HOMER3-209ENST00000596482 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
HOMER3-209ENST00000596482 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
HOMER3-209ENST00000596482 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
HOMER3-209ENST00000596482 A6NED7 52 aa6.68□□□□□ -1.34
HOMER3-209ENST00000596482 KRTAP4-9Q9BYQ8 210 aa6.59□□□□□ -1.35
HOMER3-209ENST00000596482 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
HOMER3-209ENST00000596482 PCP4P48539 62 aa6.57□□□□□ -1.36
HOMER3-209ENST00000596482 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
HOMER3-209ENST00000596482 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
HOMER3-209ENST00000596482 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
HOMER3-209ENST00000596482 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
HOMER3-209ENST00000596482 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
HOMER3-209ENST00000596482 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
HOMER3-209ENST00000596482 MT4P47944 62 aa6.43□□□□□ -1.38
HOMER3-209ENST00000596482 GPR98Q8WXG9 6306 aa6.4□□□□□ -1.38
HOMER3-209ENST00000596482 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
HOMER3-209ENST00000596482 ROMO1P60602 79 aa6.36□□□□□ -1.39
HOMER3-209ENST00000596482 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
HOMER3-209ENST00000596482 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
HOMER3-209ENST00000596482 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
HOMER3-209ENST00000596482 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.42
HOMER3-209ENST00000596482 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
HOMER3-209ENST00000596482 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
HOMER3-209ENST00000596482 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
HOMER3-209ENST00000596482 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
HOMER3-209ENST00000596482 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
HOMER3-209ENST00000596482 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
HOMER3-209ENST00000596482 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
HOMER3-209ENST00000596482 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
HOMER3-209ENST00000596482 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
HOMER3-209ENST00000596482 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
HOMER3-209ENST00000596482 MT1AP04731 61 aa5.83□□□□□ -1.48
HOMER3-209ENST00000596482 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
HOMER3-209ENST00000596482 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
HOMER3-209ENST00000596482 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
HOMER3-209ENST00000596482 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
HOMER3-209ENST00000596482 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
HOMER3-209ENST00000596482 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
HOMER3-209ENST00000596482 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
HOMER3-209ENST00000596482 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
HOMER3-209ENST00000596482 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
HOMER3-209ENST00000596482 MT3P25713 68 aa5.34□□□□□ -1.55
HOMER3-209ENST00000596482 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
HOMER3-209ENST00000596482 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
HOMER3-209ENST00000596482 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
HOMER3-209ENST00000596482 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
HOMER3-209ENST00000596482 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
HOMER3-209ENST00000596482 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
HOMER3-209ENST00000596482 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
HOMER3-209ENST00000596482 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
HOMER3-209ENST00000596482 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
HOMER3-209ENST00000596482 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
HOMER3-209ENST00000596482 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
HOMER3-209ENST00000596482 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
HOMER3-209ENST00000596482 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
HOMER3-209ENST00000596482 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
HOMER3-209ENST00000596482 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
HOMER3-209ENST00000596482 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
HOMER3-209ENST00000596482 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
HOMER3-209ENST00000596482 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
HOMER3-209ENST00000596482 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
HOMER3-209ENST00000596482 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
HOMER3-209ENST00000596482 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
HOMER3-209ENST00000596482 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
HOMER3-209ENST00000596482 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
HOMER3-209ENST00000596482 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
HOMER3-209ENST00000596482 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
HOMER3-209ENST00000596482 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
HOMER3-209ENST00000596482 H3BS24 57 aa3.36□□□□□ -1.87
HOMER3-209ENST00000596482 PRM1P04553 51 aa3.25□□□□□ -1.89
HOMER3-209ENST00000596482 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
HOMER3-209ENST00000596482 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
HOMER3-209ENST00000596482 INE1O15225 51 aa2.92□□□□□ -1.94
HOMER3-209ENST00000596482 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
HOMER3-209ENST00000596482 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms