RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
TRIM28-203ENST00000593582 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
TRIM28-203ENST00000593582 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
TRIM28-203ENST00000593582 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
TRIM28-203ENST00000593582 K7ERS5 55 aa5.25□□□□□ -1.57
TRIM28-203ENST00000593582 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
TRIM28-203ENST00000593582 V9GYY9 64 aa5.24□□□□□ -1.57
TRIM28-203ENST00000593582 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
TRIM28-203ENST00000593582 PSPHP1O15172 72 aa5.2□□□□□ -1.58
TRIM28-203ENST00000593582 MT4P47944 62 aa5.2□□□□□ -1.58
TRIM28-203ENST00000593582 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
TRIM28-203ENST00000593582 Q1T7F1 81 aa5.18□□□□□ -1.58
TRIM28-203ENST00000593582 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
TRIM28-203ENST00000593582 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
TRIM28-203ENST00000593582 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
TRIM28-203ENST00000593582 A6NED7 52 aa5.04□□□□□ -1.6
TRIM28-203ENST00000593582 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
TRIM28-203ENST00000593582 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
TRIM28-203ENST00000593582 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
TRIM28-203ENST00000593582 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
TRIM28-203ENST00000593582 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
TRIM28-203ENST00000593582 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
TRIM28-203ENST00000593582 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
TRIM28-203ENST00000593582 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
TRIM28-203ENST00000593582 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
TRIM28-203ENST00000593582 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
TRIM28-203ENST00000593582 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
TRIM28-203ENST00000593582 ROMO1P60602 79 aa4.86□□□□□ -1.63
TRIM28-203ENST00000593582 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
TRIM28-203ENST00000593582 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
TRIM28-203ENST00000593582 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
TRIM28-203ENST00000593582 PCP4P48539 62 aa4.79□□□□□ -1.64
TRIM28-203ENST00000593582 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
TRIM28-203ENST00000593582 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
TRIM28-203ENST00000593582 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
TRIM28-203ENST00000593582 MT1AP04731 61 aa4.62□□□□□ -1.67
TRIM28-203ENST00000593582 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
TRIM28-203ENST00000593582 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
TRIM28-203ENST00000593582 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
TRIM28-203ENST00000593582 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
TRIM28-203ENST00000593582 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
TRIM28-203ENST00000593582 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
TRIM28-203ENST00000593582 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
TRIM28-203ENST00000593582 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
TRIM28-203ENST00000593582 MT3P25713 68 aa4.25□□□□□ -1.73
TRIM28-203ENST00000593582 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
TRIM28-203ENST00000593582 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
TRIM28-203ENST00000593582 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
TRIM28-203ENST00000593582 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
TRIM28-203ENST00000593582 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
TRIM28-203ENST00000593582 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
TRIM28-203ENST00000593582 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
TRIM28-203ENST00000593582 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
TRIM28-203ENST00000593582 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
TRIM28-203ENST00000593582 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
TRIM28-203ENST00000593582 H3BS24 57 aa3.78□□□□□ -1.8
TRIM28-203ENST00000593582 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
TRIM28-203ENST00000593582 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
TRIM28-203ENST00000593582 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
TRIM28-203ENST00000593582 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
TRIM28-203ENST00000593582 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
TRIM28-203ENST00000593582 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
TRIM28-203ENST00000593582 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
TRIM28-203ENST00000593582 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
TRIM28-203ENST00000593582 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
TRIM28-203ENST00000593582 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TRIM28-203ENST00000593582 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
TRIM28-203ENST00000593582 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
TRIM28-203ENST00000593582 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TRIM28-203ENST00000593582 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
TRIM28-203ENST00000593582 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
TRIM28-203ENST00000593582 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
TRIM28-203ENST00000593582 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
TRIM28-203ENST00000593582 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
TRIM28-203ENST00000593582 PRM1P04553 51 aa2.47□□□□□ -2.01
TRIM28-203ENST00000593582 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TRIM28-203ENST00000593582 INE1O15225 51 aa2.07□□□□□ -2.08
TRIM28-203ENST00000593582 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms