RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
VPS4B-207ENST00000591519 A0A1B0GU69 56 aa4.09□□□□□ -1.75
VPS4B-207ENST00000591519 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
VPS4B-207ENST00000591519 TMEM258P61165 79 aa4.05□□□□□ -1.76
VPS4B-207ENST00000591519 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
VPS4B-207ENST00000591519 A8MU10 97 aa4□□□□□ -1.77
VPS4B-207ENST00000591519 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
VPS4B-207ENST00000591519 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
VPS4B-207ENST00000591519 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
VPS4B-207ENST00000591519 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
VPS4B-207ENST00000591519 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
VPS4B-207ENST00000591519 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
VPS4B-207ENST00000591519 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
VPS4B-207ENST00000591519 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
VPS4B-207ENST00000591519 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
VPS4B-207ENST00000591519 MT1EP04732 61 aa3.88□□□□□ -1.79
VPS4B-207ENST00000591519 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
VPS4B-207ENST00000591519 UQCR11O14957 56 aa3.86□□□□□ -1.79
VPS4B-207ENST00000591519 PSPHP1O15172 72 aa3.84□□□□□ -1.79
VPS4B-207ENST00000591519 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
VPS4B-207ENST00000591519 PCP4P48539 62 aa3.82□□□□□ -1.8
VPS4B-207ENST00000591519 MT1GP13640 62 aa3.8□□□□□ -1.8
VPS4B-207ENST00000591519 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
VPS4B-207ENST00000591519 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
VPS4B-207ENST00000591519 V9GYY9 64 aa3.8□□□□□ -1.8
VPS4B-207ENST00000591519 Q1T7F1 81 aa3.78□□□□□ -1.8
VPS4B-207ENST00000591519 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
VPS4B-207ENST00000591519 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
VPS4B-207ENST00000591519 TNP1P09430 55 aa3.75□□□□□ -1.81
VPS4B-207ENST00000591519 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
VPS4B-207ENST00000591519 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
VPS4B-207ENST00000591519 A6NED7 52 aa3.7□□□□□ -1.82
VPS4B-207ENST00000591519 K7ERS5 55 aa3.7□□□□□ -1.82
VPS4B-207ENST00000591519 MT1MQ8N339 61 aa3.7□□□□□ -1.82
VPS4B-207ENST00000591519 MT1LQ93083 61 aa3.68□□□□□ -1.82
VPS4B-207ENST00000591519 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
VPS4B-207ENST00000591519 MT4P47944 62 aa3.66□□□□□ -1.82
VPS4B-207ENST00000591519 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
VPS4B-207ENST00000591519 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
VPS4B-207ENST00000591519 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
VPS4B-207ENST00000591519 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
VPS4B-207ENST00000591519 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
VPS4B-207ENST00000591519 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
VPS4B-207ENST00000591519 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
VPS4B-207ENST00000591519 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
VPS4B-207ENST00000591519 ROMO1P60602 79 aa3.47□□□□□ -1.85
VPS4B-207ENST00000591519 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
VPS4B-207ENST00000591519 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
VPS4B-207ENST00000591519 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
VPS4B-207ENST00000591519 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
VPS4B-207ENST00000591519 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
VPS4B-207ENST00000591519 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
VPS4B-207ENST00000591519 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
VPS4B-207ENST00000591519 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.89
VPS4B-207ENST00000591519 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
VPS4B-207ENST00000591519 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
VPS4B-207ENST00000591519 MT1AP04731 61 aa3.13□□□□□ -1.91
VPS4B-207ENST00000591519 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
VPS4B-207ENST00000591519 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
VPS4B-207ENST00000591519 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
VPS4B-207ENST00000591519 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
VPS4B-207ENST00000591519 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
VPS4B-207ENST00000591519 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
VPS4B-207ENST00000591519 SVIPQ8NHG7 77 aa2.97□□□□□ -1.93
VPS4B-207ENST00000591519 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
VPS4B-207ENST00000591519 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
VPS4B-207ENST00000591519 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
VPS4B-207ENST00000591519 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
VPS4B-207ENST00000591519 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
VPS4B-207ENST00000591519 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
VPS4B-207ENST00000591519 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
VPS4B-207ENST00000591519 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
VPS4B-207ENST00000591519 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
VPS4B-207ENST00000591519 PRM1P04553 51 aa1.81□□□□□ -2.12
VPS4B-207ENST00000591519 INE1O15225 51 aa1.67□□□□□ -2.14
VPS4B-207ENST00000591519 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
VPS4B-207ENST00000591519 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 30.1 ms