RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MT1EP04732 61 aa3.82□□□□□ -1.8
SEH1L-208ENST00000590843 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
SEH1L-208ENST00000590843 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SEH1L-208ENST00000590843 MT1LQ93083 61 aa3.8□□□□□ -1.8
SEH1L-208ENST00000590843 MT3P25713 68 aa3.79□□□□□ -1.8
SEH1L-208ENST00000590843 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
SEH1L-208ENST00000590843 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
SEH1L-208ENST00000590843 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
SEH1L-208ENST00000590843 MT1MQ8N339 61 aa3.74□□□□□ -1.81
SEH1L-208ENST00000590843 LYSTQ99698 3801 aa3.74□□□□□ -1.81
SEH1L-208ENST00000590843 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
SEH1L-208ENST00000590843 CSMD3Q7Z407 3707 aa3.69□□□□□ -1.82
SEH1L-208ENST00000590843 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
SEH1L-208ENST00000590843 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
SEH1L-208ENST00000590843 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
SEH1L-208ENST00000590843 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
SEH1L-208ENST00000590843 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
SEH1L-208ENST00000590843 MT1AP04731 61 aa3.52□□□□□ -1.85
SEH1L-208ENST00000590843 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
SEH1L-208ENST00000590843 TNXBP22105 4242 aa3.5□□□□□ -1.85
SEH1L-208ENST00000590843 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SEH1L-208ENST00000590843 NEBP20929 6669 aa3.45□□□□□ -1.86
SEH1L-208ENST00000590843 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
SEH1L-208ENST00000590843 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
SEH1L-208ENST00000590843 LPAP08519 4548 aa3.41□□□□□ -1.86
SEH1L-208ENST00000590843 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
SEH1L-208ENST00000590843 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
SEH1L-208ENST00000590843 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SEH1L-208ENST00000590843 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SEH1L-208ENST00000590843 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SEH1L-208ENST00000590843 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
SEH1L-208ENST00000590843 MUC2Q02817 5179 aa3.32□□□□□ -1.88
SEH1L-208ENST00000590843 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
SEH1L-208ENST00000590843 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
SEH1L-208ENST00000590843 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
SEH1L-208ENST00000590843 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
SEH1L-208ENST00000590843 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
SEH1L-208ENST00000590843 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
SEH1L-208ENST00000590843 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
SEH1L-208ENST00000590843 USH2AO75445 5202 aa3.14□□□□□ -1.91
SEH1L-208ENST00000590843 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
SEH1L-208ENST00000590843 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
SEH1L-208ENST00000590843 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SEH1L-208ENST00000590843 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
SEH1L-208ENST00000590843 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
SEH1L-208ENST00000590843 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
SEH1L-208ENST00000590843 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SEH1L-208ENST00000590843 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
SEH1L-208ENST00000590843 PRM1P04553 51 aa2.87□□□□□ -1.95
SEH1L-208ENST00000590843 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
SEH1L-208ENST00000590843 KMT2DO14686 5537 aa2.86□□□□□ -1.95
SEH1L-208ENST00000590843 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
SEH1L-208ENST00000590843 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
SEH1L-208ENST00000590843 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
SEH1L-208ENST00000590843 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
SEH1L-208ENST00000590843 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SEH1L-208ENST00000590843 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
SEH1L-208ENST00000590843 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
SEH1L-208ENST00000590843 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
SEH1L-208ENST00000590843 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
SEH1L-208ENST00000590843 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
SEH1L-208ENST00000590843 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SEH1L-208ENST00000590843 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
SEH1L-208ENST00000590843 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
SEH1L-208ENST00000590843 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SEH1L-208ENST00000590843 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
SEH1L-208ENST00000590843 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SEH1L-208ENST00000590843 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SEH1L-208ENST00000590843 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SEH1L-208ENST00000590843 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
SEH1L-208ENST00000590843 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
SEH1L-208ENST00000590843 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
SEH1L-208ENST00000590843 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
SEH1L-208ENST00000590843 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
SEH1L-208ENST00000590843 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SEH1L-208ENST00000590843 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
SEH1L-208ENST00000590843 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
SEH1L-208ENST00000590843 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 103.1 ms