RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CRIPTQ9P021 101 aa2.62□□□□□ -1.99
TPM4-210ENST00000588507 A0A1B0GU69 56 aa2.59□□□□□ -1.99
TPM4-210ENST00000588507 PLAC4Q8WY50 150 aa2.59□□□□□ -1.99
TPM4-210ENST00000588507 UQCR11O14957 56 aa2.58□□□□□ -2
TPM4-210ENST00000588507 H0YAA0 97 aa2.57□□□□□ -2
TPM4-210ENST00000588507 DMAC1Q96GE9 116 aa2.57□□□□□ -2
TPM4-210ENST00000588507 IGKV2-30P06310 120 aa2.55□□□□□ -2
TPM4-210ENST00000588507 MT1GP13640 62 aa2.55□□□□□ -2
TPM4-210ENST00000588507 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
TPM4-210ENST00000588507 MT1EP04732 61 aa2.54□□□□□ -2
TPM4-210ENST00000588507 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
TPM4-210ENST00000588507 Q5W150 140 aa2.54□□□□□ -2
TPM4-210ENST00000588507 CSAG1Q6PB30 78 aa2.54□□□□□ -2
TPM4-210ENST00000588507 PP632Q6XCG6 107 aa2.54□□□□□ -2
TPM4-210ENST00000588507 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
TPM4-210ENST00000588507 A8MU10 97 aa2.53□□□□□ -2
TPM4-210ENST00000588507 KRTAP12-4P60329 112 aa2.53□□□□□ -2
TPM4-210ENST00000588507 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
TPM4-210ENST00000588507 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
TPM4-210ENST00000588507 IGKV2D-30A0A075B6S6 120 aa2.5□□□□□ -2.01
TPM4-210ENST00000588507 K7ERS5 55 aa2.49□□□□□ -2.01
TPM4-210ENST00000588507 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
TPM4-210ENST00000588507 MT1MQ8N339 61 aa2.48□□□□□ -2.01
TPM4-210ENST00000588507 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
TPM4-210ENST00000588507 H3BS24 57 aa2.47□□□□□ -2.01
TPM4-210ENST00000588507 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
TPM4-210ENST00000588507 S4R3F8 94 aa2.43□□□□□ -2.02
TPM4-210ENST00000588507 A0A1B0GU33 70 aa2.42□□□□□ -2.02
TPM4-210ENST00000588507 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
TPM4-210ENST00000588507 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
TPM4-210ENST00000588507 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
TPM4-210ENST00000588507 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
TPM4-210ENST00000588507 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
TPM4-210ENST00000588507 ROMO1P60602 79 aa2.34□□□□□ -2.03
TPM4-210ENST00000588507 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
TPM4-210ENST00000588507 MT1LQ93083 61 aa2.29□□□□□ -2.04
TPM4-210ENST00000588507 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
TPM4-210ENST00000588507 KRTAP3-1Q9BYR8 98 aa2.28□□□□□ -2.04
TPM4-210ENST00000588507 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
TPM4-210ENST00000588507 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
TPM4-210ENST00000588507 M0QZ58 72 aa2.24□□□□□ -2.05
TPM4-210ENST00000588507 A0A0D9SG42 100 aa2.22□□□□□ -2.05
TPM4-210ENST00000588507 R4GN34 69 aa2.21□□□□□ -2.06
TPM4-210ENST00000588507 P0C880 135 aa2.15□□□□□ -2.07
TPM4-210ENST00000588507 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
TPM4-210ENST00000588507 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
TPM4-210ENST00000588507 KRTAP15-1Q3LI76 137 aa2.14□□□□□ -2.07
TPM4-210ENST00000588507 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
TPM4-210ENST00000588507 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
TPM4-210ENST00000588507 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
TPM4-210ENST00000588507 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
TPM4-210ENST00000588507 A0A0A0MQY5 61 aa2.05□□□□□ -2.08
TPM4-210ENST00000588507 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
TPM4-210ENST00000588507 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
TPM4-210ENST00000588507 KRTAP23-1A1A580 65 aa2.03□□□□□ -2.08
TPM4-210ENST00000588507 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
TPM4-210ENST00000588507 TNP1P09430 55 aa2□□□□□ -2.09
TPM4-210ENST00000588507 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
TPM4-210ENST00000588507 MT1AP04731 61 aa1.94□□□□□ -2.1
TPM4-210ENST00000588507 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
TPM4-210ENST00000588507 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
TPM4-210ENST00000588507 INE1O15225 51 aa1.85□□□□□ -2.11
TPM4-210ENST00000588507 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
TPM4-210ENST00000588507 MT3P25713 68 aa1.83□□□□□ -2.12
TPM4-210ENST00000588507 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
TPM4-210ENST00000588507 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
TPM4-210ENST00000588507 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
TPM4-210ENST00000588507 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
TPM4-210ENST00000588507 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
TPM4-210ENST00000588507 LCE3CQ5T5A8 94 aa1.63□□□□□ -2.15
TPM4-210ENST00000588507 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TPM4-210ENST00000588507 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
TPM4-210ENST00000588507 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
TPM4-210ENST00000588507 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
TPM4-210ENST00000588507 LCE3EQ5T5B0 92 aa1.29□□□□□ -2.2
TPM4-210ENST00000588507 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
TPM4-210ENST00000588507 PRM1P04553 51 aa1.2□□□□□ -2.22
TPM4-210ENST00000588507 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms