RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
IFT20-216ENST00000588477 SEC61GP60059 68 aa5□□□□□ -1.61
IFT20-216ENST00000588477 SNURFQ9Y675 71 aa5□□□□□ -1.61
IFT20-216ENST00000588477 TNP1P09430 55 aa4.97□□□□□ -1.61
IFT20-216ENST00000588477 SMIM20Q8N5G0 67 aa4.97□□□□□ -1.61
IFT20-216ENST00000588477 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
IFT20-216ENST00000588477 A0A1B0GU33 70 aa4.96□□□□□ -1.62
IFT20-216ENST00000588477 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
IFT20-216ENST00000588477 J3QR89 54 aa4.91□□□□□ -1.62
IFT20-216ENST00000588477 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
IFT20-216ENST00000588477 COA5Q86WW8 74 aa4.88□□□□□ -1.63
IFT20-216ENST00000588477 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
IFT20-216ENST00000588477 A8MU10 97 aa4.81□□□□□ -1.64
IFT20-216ENST00000588477 A0A1B0GV90 55 aa4.79□□□□□ -1.64
IFT20-216ENST00000588477 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
IFT20-216ENST00000588477 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
IFT20-216ENST00000588477 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
IFT20-216ENST00000588477 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
IFT20-216ENST00000588477 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
IFT20-216ENST00000588477 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
IFT20-216ENST00000588477 A0A1B0GU69 56 aa4.66□□□□□ -1.66
IFT20-216ENST00000588477 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
IFT20-216ENST00000588477 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
IFT20-216ENST00000588477 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
IFT20-216ENST00000588477 MT1AP04731 61 aa4.56□□□□□ -1.68
IFT20-216ENST00000588477 K7ERU9 68 aa4.48□□□□□ -1.69
IFT20-216ENST00000588477 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
IFT20-216ENST00000588477 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
IFT20-216ENST00000588477 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
IFT20-216ENST00000588477 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
IFT20-216ENST00000588477 H7BZZ5 65 aa4.42□□□□□ -1.7
IFT20-216ENST00000588477 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
IFT20-216ENST00000588477 COX7CP15954 63 aa4.37□□□□□ -1.71
IFT20-216ENST00000588477 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
IFT20-216ENST00000588477 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
IFT20-216ENST00000588477 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
IFT20-216ENST00000588477 UQCR11O14957 56 aa4.21□□□□□ -1.74
IFT20-216ENST00000588477 MT3P25713 68 aa4.2□□□□□ -1.74
IFT20-216ENST00000588477 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
IFT20-216ENST00000588477 PCP4P48539 62 aa4.1□□□□□ -1.75
IFT20-216ENST00000588477 K7ERS5 55 aa4.08□□□□□ -1.76
IFT20-216ENST00000588477 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
IFT20-216ENST00000588477 ATP5EP56381 51 aaPredicted RBP3.96□□□□□ -1.78
IFT20-216ENST00000588477 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
IFT20-216ENST00000588477 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
IFT20-216ENST00000588477 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
IFT20-216ENST00000588477 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
IFT20-216ENST00000588477 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
IFT20-216ENST00000588477 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
IFT20-216ENST00000588477 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
IFT20-216ENST00000588477 Q1T7F1 81 aa3.77□□□□□ -1.81
IFT20-216ENST00000588477 PSPHP1O15172 72 aa3.72□□□□□ -1.81
IFT20-216ENST00000588477 ROMO1P60602 79 aa3.7□□□□□ -1.82
IFT20-216ENST00000588477 TMEM258P61165 79 aa3.68□□□□□ -1.82
IFT20-216ENST00000588477 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
IFT20-216ENST00000588477 V9GYY9 64 aa3.59□□□□□ -1.83
IFT20-216ENST00000588477 A6NED7 52 aa3.55□□□□□ -1.84
IFT20-216ENST00000588477 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
IFT20-216ENST00000588477 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
IFT20-216ENST00000588477 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
IFT20-216ENST00000588477 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
IFT20-216ENST00000588477 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
IFT20-216ENST00000588477 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
IFT20-216ENST00000588477 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
IFT20-216ENST00000588477 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
IFT20-216ENST00000588477 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
IFT20-216ENST00000588477 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
IFT20-216ENST00000588477 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
IFT20-216ENST00000588477 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
IFT20-216ENST00000588477 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
IFT20-216ENST00000588477 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
IFT20-216ENST00000588477 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
IFT20-216ENST00000588477 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
IFT20-216ENST00000588477 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
IFT20-216ENST00000588477 INE1O15225 51 aa2.04□□□□□ -2.08
IFT20-216ENST00000588477 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
IFT20-216ENST00000588477 PRM1P04553 51 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 97.5 ms