RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
PKN1-211ENST00000588200 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
PKN1-211ENST00000588200 TNP1P09430 55 aa4.62□□□□□ -1.67
PKN1-211ENST00000588200 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
PKN1-211ENST00000588200 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
PKN1-211ENST00000588200 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
PKN1-211ENST00000588200 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
PKN1-211ENST00000588200 TMEM258P61165 79 aa4.55□□□□□ -1.68
PKN1-211ENST00000588200 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
PKN1-211ENST00000588200 UQCR11O14957 56 aa4.5□□□□□ -1.69
PKN1-211ENST00000588200 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
PKN1-211ENST00000588200 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
PKN1-211ENST00000588200 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
PKN1-211ENST00000588200 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
PKN1-211ENST00000588200 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
PKN1-211ENST00000588200 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
PKN1-211ENST00000588200 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
PKN1-211ENST00000588200 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
PKN1-211ENST00000588200 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
PKN1-211ENST00000588200 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
PKN1-211ENST00000588200 PSPHP1O15172 72 aa4.32□□□□□ -1.72
PKN1-211ENST00000588200 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
PKN1-211ENST00000588200 K7ERS5 55 aa4.31□□□□□ -1.72
PKN1-211ENST00000588200 V9GYY9 64 aa4.3□□□□□ -1.72
PKN1-211ENST00000588200 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
PKN1-211ENST00000588200 Q1T7F1 81 aa4.28□□□□□ -1.72
PKN1-211ENST00000588200 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
PKN1-211ENST00000588200 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
PKN1-211ENST00000588200 A6NED7 52 aa4.16□□□□□ -1.74
PKN1-211ENST00000588200 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
PKN1-211ENST00000588200 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
PKN1-211ENST00000588200 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
PKN1-211ENST00000588200 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
PKN1-211ENST00000588200 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
PKN1-211ENST00000588200 MT1AP04731 61 aa4.04□□□□□ -1.76
PKN1-211ENST00000588200 ROMO1P60602 79 aa4.02□□□□□ -1.77
PKN1-211ENST00000588200 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
PKN1-211ENST00000588200 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
PKN1-211ENST00000588200 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
PKN1-211ENST00000588200 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
PKN1-211ENST00000588200 PCP4P48539 62 aa3.93□□□□□ -1.78
PKN1-211ENST00000588200 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
PKN1-211ENST00000588200 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
PKN1-211ENST00000588200 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
PKN1-211ENST00000588200 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
PKN1-211ENST00000588200 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
PKN1-211ENST00000588200 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
PKN1-211ENST00000588200 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
PKN1-211ENST00000588200 MT3P25713 68 aa3.71□□□□□ -1.82
PKN1-211ENST00000588200 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PKN1-211ENST00000588200 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
PKN1-211ENST00000588200 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
PKN1-211ENST00000588200 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
PKN1-211ENST00000588200 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
PKN1-211ENST00000588200 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
PKN1-211ENST00000588200 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
PKN1-211ENST00000588200 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PKN1-211ENST00000588200 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
PKN1-211ENST00000588200 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
PKN1-211ENST00000588200 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
PKN1-211ENST00000588200 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
PKN1-211ENST00000588200 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
PKN1-211ENST00000588200 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PKN1-211ENST00000588200 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
PKN1-211ENST00000588200 SVIPQ8NHG7 77 aa2.8□□□□□ -1.96
PKN1-211ENST00000588200 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
PKN1-211ENST00000588200 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
PKN1-211ENST00000588200 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
PKN1-211ENST00000588200 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PKN1-211ENST00000588200 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
PKN1-211ENST00000588200 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PKN1-211ENST00000588200 H3BS24 57 aa2.3□□□□□ -2.04
PKN1-211ENST00000588200 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
PKN1-211ENST00000588200 PRM1P04553 51 aa2.07□□□□□ -2.08
PKN1-211ENST00000588200 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
PKN1-211ENST00000588200 INE1O15225 51 aa1.77□□□□□ -2.13
PKN1-211ENST00000588200 A0A0A0MQY5 61 aa1.76□□□□□ -2.13
PKN1-211ENST00000588200 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms