RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 PCP4P48539 62 aa7.57□□□□□ -1.2
PKN1-210ENST00000587429 KRTAP4-3Q9BYR4 195 aa7.57□□□□□ -1.2
PKN1-210ENST00000587429 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
PKN1-210ENST00000587429 UQCR11O14957 56 aa7.52□□□□□ -1.21
PKN1-210ENST00000587429 V9GYY9 64 aa7.5□□□□□ -1.21
PKN1-210ENST00000587429 MT4P47944 62 aa7.48□□□□□ -1.21
PKN1-210ENST00000587429 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
PKN1-210ENST00000587429 Q1T7F1 81 aa7.46□□□□□ -1.22
PKN1-210ENST00000587429 PSPHP1O15172 72 aa7.42□□□□□ -1.22
PKN1-210ENST00000587429 HMCN1Q96RW7 5635 aa7.39□□□□□ -1.23
PKN1-210ENST00000587429 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
PKN1-210ENST00000587429 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
PKN1-210ENST00000587429 KRTAP12-3P60328 96 aa7.37□□□□□ -1.23
PKN1-210ENST00000587429 KRTAP5-4Q6L8H1 288 aa7.36□□□□□ -1.23
PKN1-210ENST00000587429 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
PKN1-210ENST00000587429 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
PKN1-210ENST00000587429 A6NED7 52 aa7.19□□□□□ -1.26
PKN1-210ENST00000587429 K7ERS5 55 aa7.19□□□□□ -1.26
PKN1-210ENST00000587429 AHNAK2Q8IVF2 5795 aa7.17□□□□□ -1.26
PKN1-210ENST00000587429 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
PKN1-210ENST00000587429 KRTAP5-10Q6L8G5 202 aa7.05□□□□□ -1.28
PKN1-210ENST00000587429 KRTAP5-5Q701N2 237 aaPredicted RBP7.05□□□□□ -1.28
PKN1-210ENST00000587429 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
PKN1-210ENST00000587429 KRTAP20-2Q3LI61 65 aa6.96□□□□□ -1.3
PKN1-210ENST00000587429 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
PKN1-210ENST00000587429 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
PKN1-210ENST00000587429 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
PKN1-210ENST00000587429 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
PKN1-210ENST00000587429 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
PKN1-210ENST00000587429 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
PKN1-210ENST00000587429 KRTAP19-4Q3LI73 84 aa6.85□□□□□ -1.31
PKN1-210ENST00000587429 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
PKN1-210ENST00000587429 KRTAP5-7Q6L8G8 165 aa6.77□□□□□ -1.33
PKN1-210ENST00000587429 ROMO1P60602 79 aa6.76□□□□□ -1.33
PKN1-210ENST00000587429 SYNE1Q8NF91 8797 aaKnown RBP6.76□□□□□ -1.33
PKN1-210ENST00000587429 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
PKN1-210ENST00000587429 MT1AP04731 61 aa6.52□□□□□ -1.37
PKN1-210ENST00000587429 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
PKN1-210ENST00000587429 KRTAP9-6A8MVA2 160 aa6.46□□□□□ -1.38
PKN1-210ENST00000587429 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
PKN1-210ENST00000587429 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
PKN1-210ENST00000587429 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
PKN1-210ENST00000587429 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
PKN1-210ENST00000587429 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
PKN1-210ENST00000587429 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
PKN1-210ENST00000587429 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
PKN1-210ENST00000587429 MT3P25713 68 aa5.96□□□□□ -1.46
PKN1-210ENST00000587429 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
PKN1-210ENST00000587429 MUC5BQ9HC84 5762 aaPredicted RBP5.9□□□□□ -1.47
PKN1-210ENST00000587429 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
PKN1-210ENST00000587429 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
PKN1-210ENST00000587429 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
PKN1-210ENST00000587429 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
PKN1-210ENST00000587429 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
PKN1-210ENST00000587429 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
PKN1-210ENST00000587429 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
PKN1-210ENST00000587429 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
PKN1-210ENST00000587429 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
PKN1-210ENST00000587429 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
PKN1-210ENST00000587429 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
PKN1-210ENST00000587429 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
PKN1-210ENST00000587429 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
PKN1-210ENST00000587429 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
PKN1-210ENST00000587429 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
PKN1-210ENST00000587429 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
PKN1-210ENST00000587429 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
PKN1-210ENST00000587429 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
PKN1-210ENST00000587429 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
PKN1-210ENST00000587429 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
PKN1-210ENST00000587429 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
PKN1-210ENST00000587429 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
PKN1-210ENST00000587429 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
PKN1-210ENST00000587429 PRM1P04553 51 aa3.48□□□□□ -1.85
PKN1-210ENST00000587429 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
PKN1-210ENST00000587429 INE1O15225 51 aa3.42□□□□□ -1.86
PKN1-210ENST00000587429 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
PKN1-210ENST00000587429 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
PKN1-210ENST00000587429 H3BS24 57 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 93.9 ms