RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732		A0A1B0GU33	70 aa		5.34	□□□□□ -1.55
SREBF1-222	ENST00000583732	KRTAP4-3	Q9BYR4	195 aa		5.34	□□□□□ -1.55
SREBF1-222	ENST00000583732	C10orf95	Q9H7T3	257 aa		5.27	□□□□□ -1.57
SREBF1-222	ENST00000583732	SMIM26	A0A096LP01	95 aa		5.26	□□□□□ -1.57
SREBF1-222	ENST00000583732	LCE3A	Q5TA76	89 aa		5.26	□□□□□ -1.57
SREBF1-222	ENST00000583732	KRTAP5-4	Q6L8H1	288 aa		5.26	□□□□□ -1.57
SREBF1-222	ENST00000583732		V9GYY9	64 aa		5.26	□□□□□ -1.57
SREBF1-222	ENST00000583732	KRTAP5-10	Q6L8G5	202 aa		5.24	□□□□□ -1.57
SREBF1-222	ENST00000583732	KRTAP4-12	Q9BQ66	201 aa		5.24	□□□□□ -1.57
SREBF1-222	ENST00000583732	LINC01558	Q9Y6Z2	57 aa		5.24	□□□□□ -1.57
SREBF1-222	ENST00000583732		Q1T7F1	81 aa		5.22	□□□□□ -1.57
SREBF1-222	ENST00000583732	PRR15L	Q9BU68	103 aa		5.21	□□□□□ -1.58
SREBF1-222	ENST00000583732		A8MU10	97 aa		5.2	□□□□□ -1.58
SREBF1-222	ENST00000583732		A0A1B0GU69	56 aa		5.18	□□□□□ -1.58
SREBF1-222	ENST00000583732	TNP1	P09430	55 aa		5.17	□□□□□ -1.58
SREBF1-222	ENST00000583732	KRTAP4-7	Q9BYR0	210 aa		5.13	□□□□□ -1.59
SREBF1-222	ENST00000583732	KRTAP9-9	Q9BYP9	154 aa		5.09	□□□□□ -1.59
SREBF1-222	ENST00000583732	KRTAP9-4	Q9BYQ2	154 aa		5.09	□□□□□ -1.59
SREBF1-222	ENST00000583732	KRTAP5-3	Q6L8H2	238 aa		5.08	□□□□□ -1.6
SREBF1-222	ENST00000583732	KRTAP5-7	Q6L8G8	165 aa		5.06	□□□□□ -1.6
SREBF1-222	ENST00000583732	UQCR11	O14957	56 aa		5.03	□□□□□ -1.6
SREBF1-222	ENST00000583732	PSPHP1	O15172	72 aa		5.03	□□□□□ -1.6
SREBF1-222	ENST00000583732	KRTAP12-3	P60328	96 aa		5.03	□□□□□ -1.6
SREBF1-222	ENST00000583732	KRTAP20-2	Q3LI61	65 aa		5.02	□□□□□ -1.61
SREBF1-222	ENST00000583732	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.96	□□□□□ -1.62
SREBF1-222	ENST00000583732		A6NED7	52 aa		4.93	□□□□□ -1.62
SREBF1-222	ENST00000583732	MIR22HG	Q0VDD5	57 aa		4.93	□□□□□ -1.62
SREBF1-222	ENST00000583732	SPRR5	A0A1B0GTR4	108 aa		4.92	□□□□□ -1.62
SREBF1-222	ENST00000583732	KRTAP12-4	P60329	112 aa		4.9	□□□□□ -1.63
SREBF1-222	ENST00000583732	SYNE1	Q8NF91	8797 aa	Known RBP	4.85	□□□□□ -1.63
SREBF1-222	ENST00000583732	CDC42SE1	Q9NRR8	79 aa		4.85	□□□□□ -1.63
SREBF1-222	ENST00000583732		H3BS24	57 aa		4.81	□□□□□ -1.64
SREBF1-222	ENST00000583732		K7ERS5	55 aa		4.8	□□□□□ -1.64
SREBF1-222	ENST00000583732	KRTAP19-4	Q3LI73	84 aa		4.78	□□□□□ -1.64
SREBF1-222	ENST00000583732	KRTAP25-1	Q3LHN0	102 aa		4.73	□□□□□ -1.65
SREBF1-222	ENST00000583732	BRK1	Q8WUW1	75 aa		4.71	□□□□□ -1.66
SREBF1-222	ENST00000583732	KRTAP4-11	Q9BYQ6	195 aa		4.63	□□□□□ -1.67
SREBF1-222	ENST00000583732	KRTAP4-2	Q9BYR5	136 aa		4.61	□□□□□ -1.67
SREBF1-222	ENST00000583732	KRTAP15-1	Q3LI76	137 aa		4.6	□□□□□ -1.67
SREBF1-222	ENST00000583732	LCE3C	Q5T5A8	94 aa		4.59	□□□□□ -1.67
SREBF1-222	ENST00000583732	PRO0628	Q9UI54	55 aa		4.59	□□□□□ -1.67
SREBF1-222	ENST00000583732	KRTAP6-1	Q3LI64	71 aa		4.57	□□□□□ -1.68
SREBF1-222	ENST00000583732	KRTAP5-2	Q701N4	177 aa		4.57	□□□□□ -1.68
SREBF1-222	ENST00000583732	MT1A	P04731	61 aa		4.55	□□□□□ -1.68
SREBF1-222	ENST00000583732	ROMO1	P60602	79 aa		4.53	□□□□□ -1.68
SREBF1-222	ENST00000583732	KRTAP23-1	A1A580	65 aa		4.48	□□□□□ -1.69
SREBF1-222	ENST00000583732	KRTAP5-8	O75690	187 aa		4.48	□□□□□ -1.69
SREBF1-222	ENST00000583732	PMAIP1	Q13794	54 aa		4.48	□□□□□ -1.69
SREBF1-222	ENST00000583732	AHNAK	Q09666	5890 aa	Known RBP	4.41	□□□□□ -1.7
SREBF1-222	ENST00000583732	KRTAP6-2	Q3LI66	62 aa		4.41	□□□□□ -1.7
SREBF1-222	ENST00000583732	MUC5AC	P98088	5654 aa		4.4	□□□□□ -1.71
SREBF1-222	ENST00000583732	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.39	□□□□□ -1.71
SREBF1-222	ENST00000583732	KRTAP9-6	A8MVA2	160 aa		4.37	□□□□□ -1.71
SREBF1-222	ENST00000583732	OBSCN	Q5VST9	7968 aa		4.34	□□□□□ -1.72
SREBF1-222	ENST00000583732	KTN1-AS1	Q86SY8	53 aa		4.27	□□□□□ -1.73
SREBF1-222	ENST00000583732	MT3	P25713	68 aa		4.17	□□□□□ -1.74
SREBF1-222	ENST00000583732	KRTAP5-1	Q6L8H4	278 aa		4.15	□□□□□ -1.75
SREBF1-222	ENST00000583732	PRAC1	Q96KF2	57 aa		4.13	□□□□□ -1.75
SREBF1-222	ENST00000583732	SVIP	Q8NHG7	77 aa		3.95	□□□□□ -1.78
SREBF1-222	ENST00000583732	LCE1E	Q5T753	118 aa		3.84	□□□□□ -1.79
SREBF1-222	ENST00000583732	LCE1B	Q5T7P3	118 aa		3.74	□□□□□ -1.81
SREBF1-222	ENST00000583732	LCE1C	Q5T751	118 aa		3.58	□□□□□ -1.84
SREBF1-222	ENST00000583732	LUZP6	Q538Z0	58 aa		3.52	□□□□□ -1.85
SREBF1-222	ENST00000583732	KRTAP5-11	Q6L8G4	156 aa		3.28	□□□□□ -1.88
SREBF1-222	ENST00000583732	LCE3D	Q9BYE3	92 aa		3.26	□□□□□ -1.89
SREBF1-222	ENST00000583732	NDUFAF8	A1L188	74 aa		3.22	□□□□□ -1.89
SREBF1-222	ENST00000583732	LCE1F	Q5T754	118 aa		3.22	□□□□□ -1.89
SREBF1-222	ENST00000583732	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.21	□□□□□ -1.9
SREBF1-222	ENST00000583732	PHGR1	C9JFL3	82 aa		3.1	□□□□□ -1.91
SREBF1-222	ENST00000583732		A0A0A0MQY5	61 aa		3.07	□□□□□ -1.92
SREBF1-222	ENST00000583732	LCE3E	Q5T5B0	92 aa		3.02	□□□□□ -1.93
SREBF1-222	ENST00000583732	KRTAP21-2	Q3LI59	83 aa		2.99	□□□□□ -1.93
SREBF1-222	ENST00000583732	KRTAP4-4	Q9BYR3	166 aa		2.85	□□□□□ -1.95
SREBF1-222	ENST00000583732	INE1	O15225	51 aa		2.77	□□□□□ -1.97
SREBF1-222	ENST00000583732	MUC19	Q7Z5P9	8384 aa		2.71	□□□□□ -1.98
SREBF1-222	ENST00000583732	KRTAP21-1	Q3LI58	79 aa		2.32	□□□□□ -2.04
SREBF1-222	ENST00000583732	PRM1	P04553	51 aa		2.3	□□□□□ -2.04
SREBF1-222	ENST00000583732	MUC16	Q8WXI7	14507 aa		1.85	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms