RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.038e-19■■□□□ 11.4
SREBF1-222ENST00000583732 EFTUD2Q15029 972 aaKnown RBP eCLIP14.02□□□□□ -0.171e-14■■■■■ 28.2
SREBF1-222ENST00000583732 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.467e-14■■■□□ 16.2
SREBF1-222ENST00000583732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.88□□□□□ -0.033e-12■■□□□ 13.6
SREBF1-222ENST00000583732 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.354e-11■■■□□ 15.8
SREBF1-222ENST00000583732 PCBP1Q15365 356 aaKnown RBP eCLIP16.81■□□□□ 0.287e-11■■■■□ 19.9
SREBF1-222ENST00000583732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.398e-11■■■■■ 32.9
SREBF1-222ENST00000583732 SF3B4Q15427 424 aaKnown RBP eCLIP13.81□□□□□ -0.21e-10■■■■■ 27.7
SREBF1-222ENST00000583732 HNRNPKP61978 463 aaKnown RBP eCLIP15.41■□□□□ 0.065e-10■■■□□ 18.8
SREBF1-222ENST00000583732 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.228e-10■□□□□ 10.5
SREBF1-222ENST00000583732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.391e-9■□□□□ 9.8
SREBF1-222ENST00000583732 ZRANB2O95218 330 aaKnown RBP eCLIP14.75□□□□□ -0.051e-9■□□□□ 8
SREBF1-222ENST00000583732 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.49■□□□□ 0.551e-9■■■■□ 21.1
SREBF1-222ENST00000583732 PCBP2Q15366 365 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■□□□ 12.4
SREBF1-222ENST00000583732 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.933e-9■■■■■ 32
SREBF1-222ENST00000583732 RBM15Q96T37 977 aaKnown RBP eCLIP15.22■□□□□ 0.035e-9■■□□□ 11.5
SREBF1-222ENST00000583732 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.317e-9■■■□□ 14.7
SREBF1-222ENST00000583732 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.78□□□□□ -0.041e-8■■■■■ 31.6
SREBF1-222ENST00000583732 DDX3XO00571 662 aaKnown RBP eCLIP15.13■□□□□ 0.012e-8■□□□□ 10.8
SREBF1-222ENST00000583732 PPIGQ13427 754 aaKnown RBP eCLIP17.88■□□□□ 0.454e-8■■□□□ 12.7
SREBF1-222ENST00000583732 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.76■□□□□ 0.114e-8■■□□□ 13
SREBF1-222ENST00000583732 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.4□□□□□ -0.16e-8■■□□□ 13.6
SREBF1-222ENST00000583732 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.571e-7■□□□□ 8.1
SREBF1-222ENST00000583732 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■□□□ 11.4
SREBF1-222ENST00000583732 EWSR1Q01844 656 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■■■□ 20.1
SREBF1-222ENST00000583732 EIF4G2P78344 907 aaKnown RBP eCLIP20.86■□□□□ 0.932e-7■■■■□ 25.1
SREBF1-222ENST00000583732 SMNDC1O75940 238 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■□□□ 14
SREBF1-222ENST00000583732 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.273e-7■□□□□ 10.9
SREBF1-222ENST00000583732 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.514e-7■■■□□ 15.4
SREBF1-222ENST00000583732 DKC1O60832 514 aaKnown RBP eCLIP16.93■□□□□ 0.35e-7■■■■□ 19.3
SREBF1-222ENST00000583732 TARDBPQ13148 414 aaKnown RBP eCLIP15.54■□□□□ 0.085e-7■■■■□ 20.7
SREBF1-222ENST00000583732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.165e-7■■■■■ 97.7
SREBF1-222ENST00000583732 SF3A3Q12874 501 aaKnown RBP eCLIP12.82□□□□□ -0.366e-7■■■■□ 23.5
SREBF1-222ENST00000583732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.17e-7■■■□□ 17.9
SREBF1-222ENST00000583732 SRSF7Q16629 238 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■□□□ 12.8
SREBF1-222ENST00000583732 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.071e-6■□□□□ 10.8
SREBF1-222ENST00000583732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■■■□ 25.1
SREBF1-222ENST00000583732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.18■■□□□ 1.621e-6■■□□□ 11.6
SREBF1-222ENST00000583732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■□□ 17.8
SREBF1-222ENST00000583732 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■□□□□ 9.3
SREBF1-222ENST00000583732 SRSF1Q07955 248 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■□□□ 11.6
SREBF1-222ENST00000583732 NKRFO15226 690 aaKnown RBP eCLIP17.72■□□□□ 0.432e-6■■□□□ 12
SREBF1-222ENST00000583732 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■■■■ 69.2
SREBF1-222ENST00000583732 NONOQ15233 471 aaKnown RBP eCLIP17.01■□□□□ 0.313e-6■■■□□ 17.5
SREBF1-222ENST00000583732 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.563e-6■■■■□ 20.1
SREBF1-222ENST00000583732 FUSP35637 526 aaKnown RBP eCLIP10.41□□□□□ -0.744e-6■□□□□ 11.3
SREBF1-222ENST00000583732 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.764e-6■■□□□ 14
SREBF1-222ENST00000583732 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.224e-6■■■□□ 17.5
SREBF1-222ENST00000583732 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.95■□□□□ 0.147e-6■□□□□ 9.4
SREBF1-222ENST00000583732 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.47e-6■□□□□ 8.1
SREBF1-222ENST00000583732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.478e-6■■■□□ 18.6
Retrieved 51 of 51 RNA–protein pairs in 11.2 ms