RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 UGGT1Q9NYU2 1555 aa-0.96□□□□□ -2.56
SMCHD1-207ENST00000581711 WFDC10BQ8IUB3 73 aa-0.98□□□□□ -2.57
SMCHD1-207ENST00000581711 IGIPA6NJ69 53 aa-1□□□□□ -2.57
SMCHD1-207ENST00000581711 KIF21BO75037 1637 aa-1□□□□□ -2.57
SMCHD1-207ENST00000581711 DEFB4AO15263 64 aa-1.01□□□□□ -2.57
SMCHD1-207ENST00000581711 EFCAB5A4FU69 1503 aa-1.02□□□□□ -2.57
SMCHD1-207ENST00000581711 RPS29P62273 56 aaKnown RBP-1.02□□□□□ -2.57
SMCHD1-207ENST00000581711 CCDC180Q9P1Z9 1646 aa-1.03□□□□□ -2.57
SMCHD1-207ENST00000581711 H0YGX0 51 aa-1.03□□□□□ -2.57
SMCHD1-207ENST00000581711 DEFB124Q8NES8 71 aa-1.03□□□□□ -2.57
SMCHD1-207ENST00000581711 LEAP2Q969E1 77 aa-1.03□□□□□ -2.57
SMCHD1-207ENST00000581711 NFAT5O94916 1531 aa-1.04□□□□□ -2.58
SMCHD1-207ENST00000581711 S100ZQ8WXG8 99 aa-1.04□□□□□ -2.58
SMCHD1-207ENST00000581711 LMO7Q8WWI1 1683 aa-1.04□□□□□ -2.58
SMCHD1-207ENST00000581711 POLR2KP53803 58 aaKnown RBP-1.05□□□□□ -2.58
SMCHD1-207ENST00000581711 DEFB131AP59861 70 aa-1.05□□□□□ -2.58
SMCHD1-207ENST00000581711 SCRIBQ14160 1630 aa-1.05□□□□□ -2.58
SMCHD1-207ENST00000581711 NRXN3Q9Y4C0 1643 aa-1.07□□□□□ -2.58
SMCHD1-207ENST00000581711 A0A087WWC5 75 aa-1.07□□□□□ -2.58
SMCHD1-207ENST00000581711 DEFB136Q30KP8 78 aa-1.07□□□□□ -2.58
SMCHD1-207ENST00000581711 ABCA10Q8WWZ4 1543 aa-1.07□□□□□ -2.58
SMCHD1-207ENST00000581711 MROH2AA6NES4 1674 aa-1.07□□□□□ -2.58
SMCHD1-207ENST00000581711 CPS1P31327 1500 aa-1.09□□□□□ -2.58
SMCHD1-207ENST00000581711 SYCP2Q9BX26 1530 aa-1.1□□□□□ -2.58
SMCHD1-207ENST00000581711 PLNP26678 52 aa-1.11□□□□□ -2.59
SMCHD1-207ENST00000581711 TTTY10Q9BZA0 68 aa-1.11□□□□□ -2.59
SMCHD1-207ENST00000581711 TFF3Q07654 80 aa-1.12□□□□□ -2.59
SMCHD1-207ENST00000581711 AGLP35573 1532 aa-1.12□□□□□ -2.59
SMCHD1-207ENST00000581711 SMIM5Q71RC9 77 aa-1.13□□□□□ -2.59
SMCHD1-207ENST00000581711 ABCA5Q8WWZ7 1642 aa-1.14□□□□□ -2.59
SMCHD1-207ENST00000581711 DDX60Q8IY21 1712 aaKnown RBP-1.14□□□□□ -2.59
SMCHD1-207ENST00000581711 PRXQ9BXM0 1461 aa-1.16□□□□□ -2.59
SMCHD1-207ENST00000581711 SMIM2Q9BVW6 85 aa-1.16□□□□□ -2.6
SMCHD1-207ENST00000581711 CLTCL1P53675 1640 aa-1.18□□□□□ -2.6
SMCHD1-207ENST00000581711 IQGAP1P46940 1657 aa-1.2□□□□□ -2.6
SMCHD1-207ENST00000581711 TRPM2O94759 1503 aa-1.2□□□□□ -2.6
SMCHD1-207ENST00000581711 ADCY10Q96PN6 1610 aa-1.2□□□□□ -2.6
SMCHD1-207ENST00000581711 ABCC8Q09428 1581 aa-1.22□□□□□ -2.61
SMCHD1-207ENST00000581711 CMC2Q9NRP2 79 aa-1.24□□□□□ -2.61
SMCHD1-207ENST00000581711 FANCD2Q9BXW9 1451 aa-1.24□□□□□ -2.61
SMCHD1-207ENST00000581711 NDUFA1O15239 70 aa-1.27□□□□□ -2.61
SMCHD1-207ENST00000581711 ERICH3Q5RHP9 1530 aa-1.29□□□□□ -2.62
SMCHD1-207ENST00000581711 SMIM31A0A1B0GVY4 71 aa-1.29□□□□□ -2.62
SMCHD1-207ENST00000581711 STATHP02808 62 aa-1.31□□□□□ -2.62
SMCHD1-207ENST00000581711 TOMM7Q9P0U1 55 aa-1.33□□□□□ -2.62
SMCHD1-207ENST00000581711 LINC01590Q5TEZ4 76 aa-1.36□□□□□ -2.63
SMCHD1-207ENST00000581711 MROH2BQ7Z745 1585 aa-1.37□□□□□ -2.63
SMCHD1-207ENST00000581711 RHPN1-AS1Q9BWJ2 59 aa-1.37□□□□□ -2.63
SMCHD1-207ENST00000581711 DUOX1Q9NRD9 1551 aa-1.41□□□□□ -2.63
SMCHD1-207ENST00000581711 DEFB133Q30KQ1 61 aa-1.41□□□□□ -2.64
SMCHD1-207ENST00000581711 SNRPGP15A8MWD9 76 aa-1.44□□□□□ -2.64
SMCHD1-207ENST00000581711 SAMD9LQ8IVG5 1584 aa-1.45□□□□□ -2.64
SMCHD1-207ENST00000581711 A0A096LNI7 61 aa-1.46□□□□□ -2.64
SMCHD1-207ENST00000581711 H3BSH0 61 aa-1.47□□□□□ -2.64
SMCHD1-207ENST00000581711 HTN1P15515 57 aa-1.47□□□□□ -2.64
SMCHD1-207ENST00000581711 RPL39P62891 51 aaKnown RBP-1.47□□□□□ -2.64
SMCHD1-207ENST00000581711 CD52P31358 61 aa-1.49□□□□□ -2.65
SMCHD1-207ENST00000581711 IQGAP2Q13576 1575 aa-1.51□□□□□ -2.65
SMCHD1-207ENST00000581711 TOP2AP11388 1531 aaKnown RBP-1.53□□□□□ -2.65
SMCHD1-207ENST00000581711 RPL39LQ96EH5 51 aaKnown RBP-1.55□□□□□ -2.66
SMCHD1-207ENST00000581711 ATP7AQ04656 1500 aa-1.56□□□□□ -2.66
SMCHD1-207ENST00000581711 TOMM5Q8N4H5 51 aa-1.57□□□□□ -2.66
SMCHD1-207ENST00000581711 DEFB108AA8MXU0 73 aa-1.59□□□□□ -2.66
SMCHD1-207ENST00000581711 HTN3P15516 51 aa-1.6□□□□□ -2.67
SMCHD1-207ENST00000581711 LINC01556Q5JQF7 62 aa-1.6□□□□□ -2.67
SMCHD1-207ENST00000581711 H3BUX3 64 aa-1.68□□□□□ -2.68
SMCHD1-207ENST00000581711 DEFB108BQ8NET1 73 aa-1.69□□□□□ -2.68
SMCHD1-207ENST00000581711 APELAP0DMC3 54 aa-1.71□□□□□ -2.68
SMCHD1-207ENST00000581711 K7EIM0 57 aa-1.77□□□□□ -2.69
SMCHD1-207ENST00000581711 A0A096LPF7 62 aa-1.79□□□□□ -2.7
SMCHD1-207ENST00000581711 ARHGAP5-AS1Q96IT6 56 aa-1.84□□□□□ -2.7
SMCHD1-207ENST00000581711 GCC2Q8IWJ2 1684 aa-1.84□□□□□ -2.7
SMCHD1-207ENST00000581711 COX14Q96I36 57 aa-1.87□□□□□ -2.71
SMCHD1-207ENST00000581711 PRCDQ00LT1 54 aa-1.89□□□□□ -2.71
SMCHD1-207ENST00000581711 SNRPGP62308 76 aaKnown RBP-1.91□□□□□ -2.72
SMCHD1-207ENST00000581711 TMEM167AQ8TBQ9 72 aa-1.94□□□□□ -2.72
SMCHD1-207ENST00000581711 Q9Y3F1 56 aa-2.03□□□□□ -2.73
SMCHD1-207ENST00000581711 RPL39P5Q59GN2 51 aa-2.07□□□□□ -2.74
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms