RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	KRTAP4-9	Q9BYQ8	210 aa		7.64	□□□□□ -1.19
ACADVL-223	ENST00000580263	MIR22HG	Q0VDD5	57 aa		7.61	□□□□□ -1.19
ACADVL-223	ENST00000580263	KRTAP4-3	Q9BYR4	195 aa		7.59	□□□□□ -1.19
ACADVL-223	ENST00000580263	KRTAP12-3	P60328	96 aa		7.53	□□□□□ -1.2
ACADVL-223	ENST00000580263	PSPHP1	O15172	72 aa		7.51	□□□□□ -1.21
ACADVL-223	ENST00000580263		V9GYY9	64 aa		7.47	□□□□□ -1.21
ACADVL-223	ENST00000580263		Q1T7F1	81 aa		7.45	□□□□□ -1.22
ACADVL-223	ENST00000580263	LCE1D	Q5T752	114 aa		7.45	□□□□□ -1.22
ACADVL-223	ENST00000580263	LCE4A	Q5TA78	99 aa		7.43	□□□□□ -1.22
ACADVL-223	ENST00000580263	KRTAP4-7	Q9BYR0	210 aa		7.43	□□□□□ -1.22
ACADVL-223	ENST00000580263	KRTAP25-1	Q3LHN0	102 aa		7.42	□□□□□ -1.22
ACADVL-223	ENST00000580263		K7ERS5	55 aa		7.41	□□□□□ -1.22
ACADVL-223	ENST00000580263	MT4	P47944	62 aa		7.38	□□□□□ -1.23
ACADVL-223	ENST00000580263	KRTAP5-4	Q6L8H1	288 aa		7.32	□□□□□ -1.24
ACADVL-223	ENST00000580263	HMCN1	Q96RW7	5635 aa		7.26	□□□□□ -1.25
ACADVL-223	ENST00000580263		A6NED7	52 aa		7.23	□□□□□ -1.25
ACADVL-223	ENST00000580263	KRTAP4-6	Q9BYQ5	205 aa		7.19	□□□□□ -1.26
ACADVL-223	ENST00000580263	AHNAK2	Q8IVF2	5795 aa		7.17	□□□□□ -1.26
ACADVL-223	ENST00000580263	KRTAP23-1	A1A580	65 aa		7.12	□□□□□ -1.27
ACADVL-223	ENST00000580263	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.08	□□□□□ -1.28
ACADVL-223	ENST00000580263	RPS28	P62857	69 aa	Known RBP	7.05	□□□□□ -1.28
ACADVL-223	ENST00000580263	CDC42SE1	Q9NRR8	79 aa		7.05	□□□□□ -1.28
ACADVL-223	ENST00000580263	KRTAP15-1	Q3LI76	137 aa		7.04	□□□□□ -1.28
ACADVL-223	ENST00000580263	LOC100996750	A0A140TA64	210 aa		7.03	□□□□□ -1.28
ACADVL-223	ENST00000580263	KRTAP5-10	Q6L8G5	202 aa		7.03	□□□□□ -1.28
ACADVL-223	ENST00000580263	PCP4	P48539	62 aa		7.01	□□□□□ -1.29
ACADVL-223	ENST00000580263	KRTAP19-4	Q3LI73	84 aa		7.01	□□□□□ -1.29
ACADVL-223	ENST00000580263	ROMO1	P60602	79 aa		6.95	□□□□□ -1.3
ACADVL-223	ENST00000580263	LCE3C	Q5T5A8	94 aa		6.93	□□□□□ -1.3
ACADVL-223	ENST00000580263	KRTAP20-2	Q3LI61	65 aa		6.92	□□□□□ -1.3
ACADVL-223	ENST00000580263	SYNE1	Q8NF91	8797 aa	Known RBP	6.86	□□□□□ -1.31
ACADVL-223	ENST00000580263	SPRR5	A0A1B0GTR4	108 aa		6.85	□□□□□ -1.31
ACADVL-223	ENST00000580263	KRTAP12-4	P60329	112 aa		6.84	□□□□□ -1.31
ACADVL-223	ENST00000580263	KRTAP5-7	Q6L8G8	165 aa		6.77	□□□□□ -1.33
ACADVL-223	ENST00000580263	KRTAP5-3	Q6L8H2	238 aa		6.76	□□□□□ -1.33
ACADVL-223	ENST00000580263	MT1A	P04731	61 aa		6.6	□□□□□ -1.35
ACADVL-223	ENST00000580263	KRTAP9-6	A8MVA2	160 aa		6.59	□□□□□ -1.35
ACADVL-223	ENST00000580263	KRTAP6-1	Q3LI64	71 aa		6.58	□□□□□ -1.36
ACADVL-223	ENST00000580263	KRTAP5-2	Q701N4	177 aa		6.43	□□□□□ -1.38
ACADVL-223	ENST00000580263	KRTAP9-4	Q9BYQ2	154 aa		6.37	□□□□□ -1.39
ACADVL-223	ENST00000580263	KRTAP4-11	Q9BYQ6	195 aa		6.29	□□□□□ -1.4
ACADVL-223	ENST00000580263	KRTAP6-2	Q3LI66	62 aa		6.27	□□□□□ -1.41
ACADVL-223	ENST00000580263	BRK1	Q8WUW1	75 aa		6.23	□□□□□ -1.41
ACADVL-223	ENST00000580263	KRTAP5-8	O75690	187 aa		6.09	□□□□□ -1.43
ACADVL-223	ENST00000580263	OBSCN	Q5VST9	7968 aa		6.07	□□□□□ -1.44
ACADVL-223	ENST00000580263	MT3	P25713	68 aa		6.01	□□□□□ -1.45
ACADVL-223	ENST00000580263	AHNAK	Q09666	5890 aa	Known RBP	5.96	□□□□□ -1.46
ACADVL-223	ENST00000580263	MUC5AC	P98088	5654 aa		5.95	□□□□□ -1.46
ACADVL-223	ENST00000580263	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.93	□□□□□ -1.46
ACADVL-223	ENST00000580263	PMAIP1	Q13794	54 aa		5.83	□□□□□ -1.48
ACADVL-223	ENST00000580263	KRTAP5-1	Q6L8H4	278 aa		5.76	□□□□□ -1.49
ACADVL-223	ENST00000580263	KRTAP9-9	Q9BYP9	154 aa		5.74	□□□□□ -1.49
ACADVL-223	ENST00000580263	PRAC1	Q96KF2	57 aa		5.7	□□□□□ -1.5
ACADVL-223	ENST00000580263	LCE1E	Q5T753	118 aa		5.49	□□□□□ -1.53
ACADVL-223	ENST00000580263	PRO0628	Q9UI54	55 aa		5.36	□□□□□ -1.55
ACADVL-223	ENST00000580263	KRTAP4-2	Q9BYR5	136 aa		5.24	□□□□□ -1.57
ACADVL-223	ENST00000580263	LCE1B	Q5T7P3	118 aa		5.22	□□□□□ -1.57
ACADVL-223	ENST00000580263	KTN1-AS1	Q86SY8	53 aa		5.16	□□□□□ -1.58
ACADVL-223	ENST00000580263	LCE1C	Q5T751	118 aa		5.1	□□□□□ -1.59
ACADVL-223	ENST00000580263	LCE3D	Q9BYE3	92 aa		4.99	□□□□□ -1.61
ACADVL-223	ENST00000580263	SVIP	Q8NHG7	77 aa		4.98	□□□□□ -1.61
ACADVL-223	ENST00000580263	KRTAP4-12	Q9BQ66	201 aa		4.75	□□□□□ -1.65
ACADVL-223	ENST00000580263	LUZP6	Q538Z0	58 aa		4.72	□□□□□ -1.65
ACADVL-223	ENST00000580263	LCE3E	Q5T5B0	92 aa		4.71	□□□□□ -1.66
ACADVL-223	ENST00000580263	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.66	□□□□□ -1.66
ACADVL-223	ENST00000580263	KRTAP5-11	Q6L8G4	156 aa		4.63	□□□□□ -1.67
ACADVL-223	ENST00000580263	LCE1F	Q5T754	118 aa		4.46	□□□□□ -1.7
ACADVL-223	ENST00000580263	KRTAP21-2	Q3LI59	83 aa		4.33	□□□□□ -1.72
ACADVL-223	ENST00000580263	PHGR1	C9JFL3	82 aa		4.02	□□□□□ -1.77
ACADVL-223	ENST00000580263	KRTAP4-4	Q9BYR3	166 aa		3.99	□□□□□ -1.77
ACADVL-223	ENST00000580263	NDUFAF8	A1L188	74 aa		3.79	□□□□□ -1.8
ACADVL-223	ENST00000580263	MUC19	Q7Z5P9	8384 aa		3.75	□□□□□ -1.81
ACADVL-223	ENST00000580263	PRM1	P04553	51 aa		3.59	□□□□□ -1.83
ACADVL-223	ENST00000580263	KRTAP21-1	Q3LI58	79 aa		3.03	□□□□□ -1.92
ACADVL-223	ENST00000580263	INE1	O15225	51 aa		2.97	□□□□□ -1.93
ACADVL-223	ENST00000580263		A0A0A0MQY5	61 aa		2.88	□□□□□ -1.95
ACADVL-223	ENST00000580263	MUC16	Q8WXI7	14507 aa		2.66	□□□□□ -1.98
ACADVL-223	ENST00000580263		H3BS24	57 aa		2.38	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 94.5 ms