RNA–Protein interactions for RNA: ENST00000579894.5

ACADVL-222, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 429 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-222	ENST00000579894	UQCR11	O14957	56 aa		4.88	□□□□□ -1.63
ACADVL-222	ENST00000579894	KRTAP4-3	Q9BYR4	195 aa		4.86	□□□□□ -1.63
ACADVL-222	ENST00000579894	LCE1D	Q5T752	114 aa		4.84	□□□□□ -1.63
ACADVL-222	ENST00000579894	LCE4A	Q5TA78	99 aa		4.82	□□□□□ -1.64
ACADVL-222	ENST00000579894	KRTAP12-3	P60328	96 aa		4.8	□□□□□ -1.64
ACADVL-222	ENST00000579894	MT4	P47944	62 aa		4.78	□□□□□ -1.64
ACADVL-222	ENST00000579894	MIR22HG	Q0VDD5	57 aa		4.77	□□□□□ -1.65
ACADVL-222	ENST00000579894	KRTAP4-7	Q9BYR0	210 aa		4.75	□□□□□ -1.65
ACADVL-222	ENST00000579894	KRTAP5-4	Q6L8H1	288 aa		4.74	□□□□□ -1.65
ACADVL-222	ENST00000579894	HMCN1	Q96RW7	5635 aa		4.74	□□□□□ -1.65
ACADVL-222	ENST00000579894	KRTAP25-1	Q3LHN0	102 aa		4.71	□□□□□ -1.66
ACADVL-222	ENST00000579894		V9GYY9	64 aa		4.69	□□□□□ -1.66
ACADVL-222	ENST00000579894	PSPHP1	O15172	72 aa		4.68	□□□□□ -1.66
ACADVL-222	ENST00000579894		K7ERS5	55 aa		4.67	□□□□□ -1.66
ACADVL-222	ENST00000579894		Q1T7F1	81 aa		4.66	□□□□□ -1.66
ACADVL-222	ENST00000579894	KRTAP4-6	Q9BYQ5	205 aa		4.64	□□□□□ -1.67
ACADVL-222	ENST00000579894	AHNAK2	Q8IVF2	5795 aa		4.6	□□□□□ -1.67
ACADVL-222	ENST00000579894	PCP4	P48539	62 aa		4.57	□□□□□ -1.68
ACADVL-222	ENST00000579894	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.56	□□□□□ -1.68
ACADVL-222	ENST00000579894	RPS28	P62857	69 aa	Known RBP	4.52	□□□□□ -1.69
ACADVL-222	ENST00000579894	KRTAP23-1	A1A580	65 aa		4.51	□□□□□ -1.69
ACADVL-222	ENST00000579894		A6NED7	52 aa		4.51	□□□□□ -1.69
ACADVL-222	ENST00000579894	KRTAP5-10	Q6L8G5	202 aa		4.5	□□□□□ -1.69
ACADVL-222	ENST00000579894	LOC100996750	A0A140TA64	210 aa		4.49	□□□□□ -1.69
ACADVL-222	ENST00000579894	KRTAP19-4	Q3LI73	84 aa		4.49	□□□□□ -1.69
ACADVL-222	ENST00000579894	KRTAP20-2	Q3LI61	65 aa		4.48	□□□□□ -1.69
ACADVL-222	ENST00000579894	KRTAP15-1	Q3LI76	137 aa		4.47	□□□□□ -1.69
ACADVL-222	ENST00000579894	SPRR5	A0A1B0GTR4	108 aa		4.45	□□□□□ -1.7
ACADVL-222	ENST00000579894	CDC42SE1	Q9NRR8	79 aa		4.43	□□□□□ -1.7
ACADVL-222	ENST00000579894	KRTAP12-4	P60329	112 aa		4.42	□□□□□ -1.7
ACADVL-222	ENST00000579894	LCE3C	Q5T5A8	94 aa		4.42	□□□□□ -1.7
ACADVL-222	ENST00000579894	KRTAP5-7	Q6L8G8	165 aa		4.39	□□□□□ -1.71
ACADVL-222	ENST00000579894	KRTAP5-3	Q6L8H2	238 aa		4.39	□□□□□ -1.71
ACADVL-222	ENST00000579894	ROMO1	P60602	79 aa		4.37	□□□□□ -1.71
ACADVL-222	ENST00000579894	SYNE1	Q8NF91	8797 aa	Known RBP	4.34	□□□□□ -1.71
ACADVL-222	ENST00000579894	SVIP	Q8NHG7	77 aa		4.29	□□□□□ -1.72
ACADVL-222	ENST00000579894	MT1A	P04731	61 aa		4.24	□□□□□ -1.73
ACADVL-222	ENST00000579894	KRTAP6-1	Q3LI64	71 aa		4.22	□□□□□ -1.73
ACADVL-222	ENST00000579894	KRTAP9-6	A8MVA2	160 aa		4.19	□□□□□ -1.74
ACADVL-222	ENST00000579894	KRTAP5-2	Q701N4	177 aa		4.16	□□□□□ -1.74
ACADVL-222	ENST00000579894	KRTAP9-4	Q9BYQ2	154 aa		4.08	□□□□□ -1.76
ACADVL-222	ENST00000579894	KRTAP4-11	Q9BYQ6	195 aa		4.08	□□□□□ -1.76
ACADVL-222	ENST00000579894	KRTAP6-2	Q3LI66	62 aa		4.03	□□□□□ -1.76
ACADVL-222	ENST00000579894	BRK1	Q8WUW1	75 aa		3.99	□□□□□ -1.77
ACADVL-222	ENST00000579894	KRTAP5-8	O75690	187 aa		3.95	□□□□□ -1.78
ACADVL-222	ENST00000579894	AHNAK	Q09666	5890 aa	Known RBP	3.92	□□□□□ -1.78
ACADVL-222	ENST00000579894	MUC5AC	P98088	5654 aa		3.87	□□□□□ -1.79
ACADVL-222	ENST00000579894	MT3	P25713	68 aa		3.86	□□□□□ -1.79
ACADVL-222	ENST00000579894	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.8	□□□□□ -1.8
ACADVL-222	ENST00000579894	OBSCN	Q5VST9	7968 aa		3.77	□□□□□ -1.81
ACADVL-222	ENST00000579894	PMAIP1	Q13794	54 aa		3.75	□□□□□ -1.81
ACADVL-222	ENST00000579894	KRTAP9-9	Q9BYP9	154 aa		3.73	□□□□□ -1.81
ACADVL-222	ENST00000579894	KRTAP5-1	Q6L8H4	278 aa		3.72	□□□□□ -1.81
ACADVL-222	ENST00000579894	PRAC1	Q96KF2	57 aa		3.61	□□□□□ -1.83
ACADVL-222	ENST00000579894	LCE1E	Q5T753	118 aa		3.55	□□□□□ -1.84
ACADVL-222	ENST00000579894	PRO0628	Q9UI54	55 aa		3.55	□□□□□ -1.84
ACADVL-222	ENST00000579894	KRTAP4-2	Q9BYR5	136 aa		3.38	□□□□□ -1.87
ACADVL-222	ENST00000579894	KTN1-AS1	Q86SY8	53 aa		3.37	□□□□□ -1.87
ACADVL-222	ENST00000579894	LCE1B	Q5T7P3	118 aa		3.35	□□□□□ -1.87
ACADVL-222	ENST00000579894	LCE1C	Q5T751	118 aa		3.29	□□□□□ -1.88
ACADVL-222	ENST00000579894	LCE3D	Q9BYE3	92 aa		3.17	□□□□□ -1.9
ACADVL-222	ENST00000579894	KRTAP4-12	Q9BQ66	201 aa		3.06	□□□□□ -1.92
ACADVL-222	ENST00000579894	LUZP6	Q538Z0	58 aa		3.02	□□□□□ -1.93
ACADVL-222	ENST00000579894		H3BS24	57 aa		3	□□□□□ -1.93
ACADVL-222	ENST00000579894	KRTAP5-11	Q6L8G4	156 aa		3	□□□□□ -1.93
ACADVL-222	ENST00000579894	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3	□□□□□ -1.93
ACADVL-222	ENST00000579894	LCE3E	Q5T5B0	92 aa		2.98	□□□□□ -1.93
ACADVL-222	ENST00000579894	LCE1F	Q5T754	118 aa		2.89	□□□□□ -1.95
ACADVL-222	ENST00000579894	KRTAP21-2	Q3LI59	83 aa		2.77	□□□□□ -1.97
ACADVL-222	ENST00000579894		A0A0A0MQY5	61 aa		2.72	□□□□□ -1.97
ACADVL-222	ENST00000579894	PHGR1	C9JFL3	82 aa		2.68	□□□□□ -1.98
ACADVL-222	ENST00000579894	KRTAP4-4	Q9BYR3	166 aa		2.55	□□□□□ -2
ACADVL-222	ENST00000579894	NDUFAF8	A1L188	74 aa		2.52	□□□□□ -2.01
ACADVL-222	ENST00000579894	MUC19	Q7Z5P9	8384 aa		2.35	□□□□□ -2.03
ACADVL-222	ENST00000579894	PRM1	P04553	51 aa		2.24	□□□□□ -2.05
ACADVL-222	ENST00000579894	INE1	O15225	51 aa		2.21	□□□□□ -2.06
ACADVL-222	ENST00000579894	KRTAP21-1	Q3LI58	79 aa		2	□□□□□ -2.09
ACADVL-222	ENST00000579894	MUC16	Q8WXI7	14507 aa		1.75	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 83.7 ms